Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2381 ATGGAAGGTGACAAGACAACCCCAGCTCCATCAGATGGGCTCAGTGACGGTGTTCAGAAAATTAGAGCCCTGCATGGGCGAACTAGTGGCCCCACCAGGCGTTCTACAAAAGGACAGTGGACTCCTGAAGAGGATGAGATCTTGCGAAAGGCAGTTCAACGTTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGTTTCAAGGATAGAACAGATGTACAGTGTCTACACAGGTGGCAGAAAGTCTTAAACCCTGAGCTGGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATAATTGATTTGGTGAACAAATATGGGCCAAAAAAATGGTCTACTATTGCACAGCACTTACCTGGACGAATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTCAATCCTGGAATAAACAAAGAAGCATGGACCCAAGAGGAAGAGTTGGCTCTAATACGTGCGCATCAAATTTATGGGAACAGATGGGCTGAATTGACGAAGTTCTTACCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCGTCGGGTTTGCTTATACCCCATGTTGGACATCCAAATCAACCCGTGGTTTCTACATCATCGAGGTTAGTTTGTAGTGGAGATGATAGTAGTCAGAAGGGAATCAGAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCTGCTAGTGCTGGTCATCTACCGGTTTCCCGAGAAATGACAAGGGATGTTTTACATGCTAGAGAAGAAACCAAGCCAAATGAATATTCTAGTCTAGGAAAGGAGCAAAGTCCTAGTCAAGCATCATGCTCAGAGCCATATTATATACCACTGGATGAGGTTACCATATGCAACTCAGACATTGCTCGTGAAGAGGCTTCCTCTTCTCGATTCACTGAGCAAAAATACTCACAAGGACCTGGAAATTTTGCAGGCATGGATAATGGATTCCAATTACATGGTTTACCCAGTATTTCATCATTAGACTTGGGTCAGGAATTCTCACTTTTTCAAGGAGATTGTATAGTTTCTGACGAAAACCATGACATTGTGAATGCTCAATTTCATACTTCAGCGGGGTTAGGTATTGCAACATCTATGGTTCCCACATCTATGGATTCTTCTAAAGCGGAGGACATGTTGATGGCTGATGAAGAATGTTGTAGATTTCTATTTTCAGATGCAATGAATGATGGTACCTTTTCAACTGGAGATCATAACAAAGGTGTTGATGTGGTTTTGCCTGCAAGCACTTCAAATCTTTTCCAATCATCTGAGATCCAGATATCAGATGCTGATAGAACCTCAGCTGCACTCAAAACTTGTCCAACAAGATCTAATAATTTAATAGAACCTTCATGCTGCCAATCTTTCCCAATTGTTCCTTCATTGGTTTTAGTTAATGATGGTAGAATATTGTACACTGCTGAAGCCGCCCGAATGTATGGAGGAGATAATCAGCACTTTGCCTCCCACGCACATGACAGCTTCATTCACCCCAACAACTCATCCGTCTCACCTTGCATTGATATTATAGATAGCGCTGAAATGCACGATGGAACCAATATCGTGAATGATGCTTTAAGATTGGTCCCTGTAAATAATTTTACTTGTGCATCGGATGCCAAGCAAACTTGTAATCCAATGGATGAAAAGGCAGATGTACAAACAGAACAGGAGGACACAGGATCTCTATGTTATGAACCTCCTCGATTTCCAAGCTTAGATATTCCTTTCTTTAGCTGTGATCTTATACAAAATGGAGGGGATATGCAGCAAGATTTCAGTCCCCTGGGCATCCGTCGGCTTATGATGTCTTCAGTGAACAGTCCAACTCCCTTGAGGTTGTGGGAATCGCCTTCTCGTGATGATAGCCCAGATGCTTTGTTGAGAAGTGCTGCAAAAACTTTCACTAGTACACCATCCATTTTAAAGAAGCGACGCCGGGACTTGTTATCACCATTATCAGATAAGAGAATTGAGAAGAAACTTGAGACTGACATGACATTCACGTTGACTACACATTTTTCACGTTTGGATGTCATGTTTGATGACAATGAAACTCACTCCGCGAATATGCTGCCTCTATCCTCAATACAGAAAATTAAAAATGGAGCCTCTGATGATGATAAAGAAAATTGTGAGCCAGCTTTGAAAGAAAATTGTGAACCAGCTTTGAAAGGAGAACATGTCGAGGGAAAAGAGGAATCCGCCATTTTGAGGTGCAAAGAGTCAGAAAAAGATACTGGTAATAACTCTCTGGACGATGATTCGAAGATGGAGACTGATGTTGATGCCAATCCTGCTGCTGAGATTGGGCAACAACCTTCCGGTGTCTTAACCGAATGTGATATGAATGACTTGCTATTGTATTCTCCAAATCAAATTCGTTTGAGCTTGGATAGAACTCACATTTCATGTGCTAGAACTCCCAAAAACCTGAACGATAGAAGCTTGGAAGCAGCCCCACATCAGAATATCGCTCAAAAGTCATTGCATGGAAATCCCTGCACAAGTGATTGCTTCCCTTCTATTTGTGTAAAGGAGCATGAAATTTCTTCAGTTCGGCCATCTCATTGTTCATCTGCCCCTGGGGAGAATTCTGGTGATCATCCAGGGAATGATGCTGGTTTTGAAACATTCAACATATTTGGTGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCCCCTTGGTTCATTAACACTTTTCTGACTAGCCCTAGGATTGATACTGAAATAACTATTGAGGATTTTGGGTATTTAATGAGCCCAGGTGATAGAAGCTATGATGCAATTGGGTGGATGAAGCAGGTCAAGGAACAAACTGCGGCCGCATATGCCAATGCTGAGGAGATTTTGGAAATTGACACTCCTAAAGCAAAAGATGCATCTGGAAATGCCGGGGATGGGGACCAAGAAAGAAGAGACCCTAATAATCAGCCTGGCAATCAGTGTCAGTTAGCTTCTTCAAATGCTTTGACGGAGCGACGGGTACTTGACTTTAGTGAATGTGGAACACCAGGAAAGGAGAACAACAAATCTTCAGCCATGACCTTCTCAAGTCCCTCTTCATATTTGTTGAAAGGGTGTAGATAG 3147 0.422 MEGDKTTPAPSDGLSDGVQKIRALHGRTSGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLIPHVGHPNQPVVSTSSRLVCSGDDSSQKGIREEVSECSQESASAGHLPVSREMTRDVLHAREETKPNEYSSLGKEQSPSQASCSEPYYIPLDEVTICNSDIAREEASSSRFTEQKYSQGPGNFAGMDNGFQLHGLPSISSLDLGQEFSLFQGDCIVSDENHDIVNAQFHTSAGLGIATSMVPTSMDSSKAEDMLMADEECCRFLFSDAMNDGTFSTGDHNKGVDVVLPASTSNLFQSSEIQISDADRTSAALKTCPTRSNNLIEPSCCQSFPIVPSLVLVNDGRILYTAEAARMYGGDNQHFASHAHDSFIHPNNSSVSPCIDIIDSAEMHDGTNIVNDALRLVPVNNFTCASDAKQTCNPMDEKADVQTEQEDTGSLCYEPPRFPSLDIPFFSCDLIQNGGDMQQDFSPLGIRRLMMSSVNSPTPLRLWESPSRDDSPDALLRSAAKTFTSTPSILKKRRRDLLSPLSDKRIEKKLETDMTFTLTTHFSRLDVMFDDNETHSANMLPLSSIQKIKNGASDDDKENCEPALKENCEPALKGEHVEGKEESAILRCKESEKDTGNNSLDDDSKMETDVDANPAAEIGQQPSGVLTECDMNDLLLYSPNQIRLSLDRTHISCARTPKNLNDRSLEAAPHQNIAQKSLHGNPCTSDCFPSICVKEHEISSVRPSHCSSAPGENSGDHPGNDAGFETFNIFGGTPFRRSIESPSAWKSPWFINTFLTSPRIDTEITIEDFGYLMSPGDRSYDAIGWMKQVKEQTAAAYANAEEILEIDTPKAKDASGNAGDGDQERRDPNNQPGNQCQLASSNALTERRVLDFSECGTPGKENNKSSAMTFSSPSSYLLKGCR 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2381 1048 CDD SANT 91 135 IPR001005 -
Alju07g2381 1048 Gene3D - 89 140 - -
Alju07g2381 1048 PANTHER MYB PROTEIN-RELATED 37 122 - -
Alju07g2381 1048 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Alju07g2381 1048 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Alju07g2381 1048 MobiDBLite consensus disorder prediction 994 1013 - -
Alju07g2381 1048 Gene3D - 36 88 - -
Alju07g2381 1048 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Alju07g2381 1048 FunFam Transcriptional activator Myb isoform A 36 88 - -
Alju07g2381 1048 MobiDBLite consensus disorder prediction 1024 1042 - -
Alju07g2381 1048 FunFam Transcription factor MYB3R-2 142 207 - -
Alju07g2381 1048 MobiDBLite consensus disorder prediction 974 1048 - -
Alju07g2381 1048 Gene3D - 142 197 - -
Alju07g2381 1048 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Alju07g2381 1048 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Alju07g2381 1048 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Alju07g2381 1048 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Alju07g2381 1048 FunFam Transcriptional activator Myb isoform A 89 141 - -
Alju07g2381 1048 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Alju07g2381 1048 MobiDBLite consensus disorder prediction 1 42 - -
Alju07g2381 1048 MobiDBLite consensus disorder prediction 251 268 - -
Alju07g2381 1048 CDD SANT 40 83 IPR001005 -
Alju07g2381 1048 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Alju07g2381 1048 MobiDBLite consensus disorder prediction 269 283 - -
Alju07g2381 1048 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Alju07g2381 1048 SMART sant 140 188 IPR001005 -
Alju07g2381 1048 SMART sant 36 85 IPR001005 -
Alju07g2381 1048 SMART sant 88 137 IPR001005 -
Alju07g2381 1048 CDD SANT 143 183 IPR001005 -
Alju07g2381 1048 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Alju07g2381 1048 MobiDBLite consensus disorder prediction 221 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2381 Alju-ChrAlju07 49558274 49563462 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2381 9 1048 MYB Transcription Factor Family AT4G32730 43.113 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g2381 Myb_DNA-binding 3.1e-15 CL0123