Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2356 ATGGATGTAACCTTCTTGGTAATTACACATATAGCTAGTCTATGCAACTTGAAGGTGAAGACCCACATTTGTCCTAGCCAAGAGGTCTGCCTTGCCCACCTTAAAACTTTTCACACATGCGTTGCAGTATCCCTCAAGTCAGAATTTCTTCTGCAAGTGAATGAAAAAGATCAAGACCCTAATTATAAAGCATCAAAAACCCACTTGAACAAGAGTTTGCACTCCATGCAAAAGAAAGAGAAGGAAGCGATTAGGAAAGAAGGGAGGGATAAGGAAATGGAAGGAAGTGGAGGGACGTCAAAGGAGGAAACCCTACCTCCTGGCTTTCGATTTCATCCCACAGATGAAGAACTCATCACCAGCTATCTCATCAACAAGATCTCTGATTCTGCTTTCACTGCTCGAGCTGTCACCGATGTCGATCTCAACAAATGCGAGCCATGGGAGCTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAGTGGTACTTTTTCAGTCTGAGGGATAGGAAATACCCGACGGGTGTGAGAACGAACAGGGCGACAAACACAGGCTACTGGAAGACCACCGGCAAAGACAAGGAAATCCTCAACAGTGCAACATCGGAGTTGGTTGGCATGAAAAAGACTCTAGTTTTCTACAAAGGCAGAGCCCCAAGAGGTGAAAAATCCAACTGGGTCATGCACGAATACCGTATCCACTCCAAATCCTCCTTCCGACTGCACAACAAGGATGAATGGGTGGTATGCAGAGTGTTCCAGAAGAGTGGAGGAGCCAAAAAGTACCCATCGAATAACACAAGAGGGGTGAATCCATATAGCCTGGAAATAGGTCCTAACATGGTGGCACCTTCAATGATGCACCATGTTGCCGATCCTAATTCTGCTCACTTCCTCTACGGAAGGAACTTTGTCAACACTGCTTCTGACCTTGCAGAGGTTGCTAGGGTTTTGAGAGCCGCCGGAGGAGGGGCTGCCTCCACCACCGCTGCTTTCAACTTACCTATGCAAACCCATGCTCAGCTTAACTATCCCGCCGCAGCCGCCGGAGGATTTACCATTTCCGGCCTCAACTTGAATCTCGCAGGAGGAGGAGCAGCGGCAACCGCCGGGCAACCTGTTTTCCGGCAGATGAACCCTCATGATGTGGGCCCCAACATGATGACAGCTGGCAGTTCTCTGAATGTATCAGATAATGTAGGGTATGGTGCTGCAGAAATGAGCAACCCTAATAACAATATTGGTCCGAGCAACAGGTTCATTGGGATGGACCATTGTGTGGATTTAGATAACTACTGGCCTTCCTACTAA 1308 0.4809 MDVTFLVITHIASLCNLKVKTHICPSQEVCLAHLKTFHTCVAVSLKSEFLLQVNEKDQDPNYKASKTHLNKSLHSMQKKEKEAIRKEGRDKEMEGSGGTSKEETLPPGFRFHPTDEELITSYLINKISDSAFTARAVTDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSFRLHNKDEWVVCRVFQKSGGAKKYPSNNTRGVNPYSLEIGPNMVAPSMMHHVADPNSAHFLYGRNFVNTASDLAEVARVLRAAGGGAASTTAAFNLPMQTHAQLNYPAAAAGGFTISGLNLNLAGGGAAATAGQPVFRQMNPHDVGPNMMTAGSSLNVSDNVGYGAAEMSNPNNNIGPSNRFIGMDHCVDLDNYWPSY 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2356 435 ProSiteProfiles NAC domain profile. 105 254 IPR003441 GO:0003677|GO:0006355
Alju07g2356 435 Gene3D NAC domain 114 257 IPR036093 GO:0003677|GO:0006355
Alju07g2356 435 FunFam NAC domain-containing protein 100-like 114 258 - -
Alju07g2356 435 MobiDBLite consensus disorder prediction 73 98 - -
Alju07g2356 435 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 102 282 - -
Alju07g2356 435 SUPERFAMILY NAC domain 102 254 IPR036093 GO:0003677|GO:0006355
Alju07g2356 435 Pfam No apical meristem (NAM) protein 106 232 IPR003441 GO:0003677|GO:0006355
Alju07g2356 435 MobiDBLite consensus disorder prediction 61 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2356 Alju-ChrAlju07 49300973 49303292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2356 101 435 NAC Transcription Factor Family AT2G24430 51.549 2.47e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju07g2356 NAM 7.7e-40 No_clan