Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2337 ATGCAACAGAGGCTCAAGCTTCAGCAACAACAAGCCCTCATGCAGCAAGCGTTGCTTCAGCAACAGCAGATGTATCACCCAGGGATGCTAGCCGCTACTATGTCCCAGATTGAGCCTATTCCAAGTGGAAATTTGCCTCCAGGCTTTGACACTTCTACATGCCTCAGCGTTTATGTAGGAAACATTCATGTAAATGTTACTGAAAAACTTCTTGCTGAACTCTTTCAAAGTGTTGGTCCTCTCGCTGGGTGCAAACTCATAAGGAAAGAAAAGTCCTCATATGGTTTTGTGGATTACCATGATAGAGCATCTGCAGCCCTTGCAATAATGAATTTGCACGGACGCCAACTATATGGTCAGGCAATTAAGGTGAATTGGGCATATGCCAATACCCATAGGGAGGATACTTCAGGGCACTTCAATATATTTGTTGGTGATTTGAGTTCAGAGGTTACTGATGCAACTTTATTTGCATGCTTCTCAGTCTATCCTAGTTGTTCTGATGCAAAGGTCATGTGGGATCTCAAAACTGGTCGGTCAAAAGGATATGGTTTTGTTTCTTTCCGTGATCAGCAGGATGCTCAAAATGCCATCAATGATATGAATGGTAAGTGGCTGGGAAATAGGCAAATACGTTGCAACTGGGGAACCAAGGGCGCTGGTACAAGTACTAATGAGGAGAAGAACAATGACACCCAAAATGCTGTTGTCCTAACAAATGGGTCTTCTGATGGAAGTCAGGAATATAATAATGAGGATGCTCCTGAAAACAGTTCTGCCTATACCACCGTTTATGTTGGCAACCTTCCCCTTGATGTAACACAAAATGAACTCCACTATCAGTTCCATGCATTGGGGGCTGGAGTGATTGAGGAGGTCCGAGTTCAAAGGGATAAAGGTTTTGGATTTGTAAGATTCAACGCTCATGAAGAAGCAGAGCTGGCCATTCAGATGGCTAATGGAAGAATAGTTCGTGGAAAAACAATGAAGTGTTCATGGGGTAACAAGCCAACACCTCCTGGAACAGCTTCAAACCCACTACCTCCTCCTACACAACCTTATCAAATCCTTGCCACAAACCAAGGATATTCTCCAGCTGAGTTAATGGCTTATCAGCGCCGACTGGCCTTAAGTCAGGCTGCTGTATCTGGCCTTTCAGGTCAAGCTCTTGTGCATATGACTGGTCAACATGGCCTTACTGCTGCCTCTCTTGGCTTAAGCTCTGGGGCATCCCAAGCCATGTATGATGCCTATTCTGGTAATTCTTCAAGGCAGCAGCACCTCATGTACTATCGTTAA 1299 0.4465 MQQRLKLQQQQALMQQALLQQQQMYHPGMLAATMSQIEPIPSGNLPPGFDTSTCLSVYVGNIHVNVTEKLLAELFQSVGPLAGCKLIRKEKSSYGFVDYHDRASAALAIMNLHGRQLYGQAIKVNWAYANTHREDTSGHFNIFVGDLSSEVTDATLFACFSVYPSCSDAKVMWDLKTGRSKGYGFVSFRDQQDAQNAINDMNGKWLGNRQIRCNWGTKGAGTSTNEEKNNDTQNAVVLTNGSSDGSQEYNNEDAPENSSAYTTVYVGNLPLDVTQNELHYQFHALGAGVIEEVRVQRDKGFGFVRFNAHEEAELAIQMANGRIVRGKTMKCSWGNKPTPPGTASNPLPPPTQPYQILATNQGYSPAELMAYQRRLALSQAAVSGLSGQALVHMTGQHGLTAASLGLSSGASQAMYDAYSGNSSRQQHLMYYR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2337 432 Gene3D - 139 218 IPR012677 -
Alju07g2337 432 FunFam Oligouridylate-binding protein 1C 239 340 - -
Alju07g2337 432 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 129 IPR000504 GO:0003723
Alju07g2337 432 MobiDBLite consensus disorder prediction 218 257 - -
Alju07g2337 432 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 57 123 IPR000504 GO:0003723
Alju07g2337 432 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 264 330 IPR000504 GO:0003723
Alju07g2337 432 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 142 212 IPR000504 GO:0003723
Alju07g2337 432 SMART rrm2_1 141 214 IPR003954 GO:0003676
Alju07g2337 432 SMART rrm2_1 263 332 IPR003954 GO:0003676
Alju07g2337 432 FunFam Nucleolysin TIAR-like protein 139 237 - -
Alju07g2337 432 Gene3D - 239 340 IPR012677 -
Alju07g2337 432 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 140 218 IPR000504 GO:0003723
Alju07g2337 432 CDD RRM2_PUB1 139 218 - -
Alju07g2337 432 FunFam Nucleolysin TIAR-like protein 1 138 - -
Alju07g2337 432 SMART rrm1_1 263 332 IPR000504 GO:0003723
Alju07g2337 432 SMART rrm1_1 56 125 IPR000504 GO:0003723
Alju07g2337 432 SMART rrm1_1 141 214 IPR000504 GO:0003723
Alju07g2337 432 SUPERFAMILY RNA-binding domain, RBD 56 215 IPR035979 GO:0003676
Alju07g2337 432 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 52 339 - -
Alju07g2337 432 Gene3D - 1 138 IPR012677 -
Alju07g2337 432 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 262 336 IPR000504 GO:0003723
Alju07g2337 432 SUPERFAMILY RNA-binding domain, RBD 251 345 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2337 Alju-ChrAlju07 49175522 49180724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2337 141 339 Eukaryotic Initiation Factors Gene Family AT1G22760 25.837 7.97e-11 62.4