Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2321 ATGTACATTGTACCTCGCGAGGGACATCAATCAGGTGATATTGTCATAACTCTTTCTCTCTGTGGATCTTCTTCTTCTTCTTCGTGCTCTCTCTCTCTCTCAAAAGTTACGACTCATTCGTTTCTTTCTCTGAAGCCTGCAGGATTCTCAACTCTCCTTTCTCTTTCTCTGCAAACAAGAATCACACAAAGATTTAAAGTGAATAAGCAACAGATGGATGATTATTCTGGTAAACGAGCCATAGATGGGGTGGTAGTACCTAAAAAGGGGATGGCTCATGTATTTAGAGATACTGCTAATGCTAGGGACCGTAATGGTCAGTTTTGCAGCCGACCTGGTTGCAGCAGTAGAGTGAACTCTCCCAAGGATGCTAAATTTGCTTCATCTGAGAAAGGTAAATCTTCGAGGCCTCCATTCCGATCTCCAAGTCGTAAGGAAGCAGTTGGGAGTTCCTCTGGAACTTTACCAGGATCTTATAACCCAGGAAAATCCCCTATGGAGGCCCGGAAAACATTATCTTGCCAGTCAGAGACTGTTCCTTGTGAAACGAGTAGTTTGCAAGATGAATCAGAAATTTCTGAGCTTATACCACCACCTGGAAAAATTCGAAAAGGGCCTCAAGCTGAAGGGGGAAGTTCAGAGTCTACTAATCTCATATCAATGGAAGTAGGAAGCTCTAGTGTAGCATCAAAATCAACATATAGGAGGAATCTTCGTCAAAAGCCTGGATTGAATGGTCAAGAATCTAATAAAAGCTCTGGCTCAGTGACACGAGCTGGAGGTAACAGGTATGGGTTGAGGAACCTTAGATGCAATTCTATATCTGATGTAATCCCTTCAGGCTGTGCATCATCAGATTCAACCCATAATAGAAGGAAAGATGTGATGAAAAAGAGGAACTGTGAAGGAGAAAGTAGGTCTACTGCTAGAGGTAAGAAGATGAGTGGGCCCTCATTGGATGGACATAATTCTGGCTCCAGAAATGGTATATCAATATCAGATTCAAGAAGATCCAGAAACTTTCCTCCTCCCAGGGATAACAACAACATTGGATCAGTTAGAACTAGAAGATCTTTCAATGGTCATGGCAGGGGAAGGCTTCCCAGCCAACCAAATGAAAACCCTGCACCACCCAATGAATCCCCTATTACCATATCATCTTTGCCTCATTCCAGTGACCTTAATGCTCATGATTTATTACATCATTCCTCGTTGGAGACTCCCCTCAGAAGTCCAAGATCTTACAGTAGACCAGGTAGTAGCAGTGAGCGGTTATTTGGTGTTCTGCCCCCATCTCCTTCAGAATATGGGATCACTCGTTCTCTCATGAACCGGGACAGCTTTCTACGCTTTAACATGGATGGTATTGCAGAGGTATTATTGGCACTTGAGAGGATTGAACAAGATGAAGATCTTTCACATGAGCAAATTCTGTTACTGGAGACCAACTTGTTGCTTCATGGACTAAACTTCTATGATCAACATAGAGACATGCGATTGGATATTGATAACATGTCATACGAGGAACTATTGGCTTTGGAAGAGAGGATGGGTTCTGTGAGCACAGCTCTAACAGAGGAAGCACTTTCAGAATGCCTAAAGAGAAGTTTCTACCAACCTGCCACTTCAGATGATGCAGCCGAGAGCTGCAATGAGGATAAGGATGACATCAAATGCAGCATCTGTCAGGAGGAATATGTGGAAGCAGAGGAAGTGGGGAGTCTAAAATGCGAGCATAGGTATCATGTCGGGTGCATACAGCAATGGCTGCGCCACAAGAACTGGTGTCCAATTTGCAAAGCTTTTGCGGCACCATCACATTCCTCTTCTTCAACTTCAACCCTTTGA 1848 0.4356 MYIVPREGHQSGDIVITLSLCGSSSSSSCSLSLSKVTTHSFLSLKPAGFSTLLSLSLQTRITQRFKVNKQQMDDYSGKRAIDGVVVPKKGMAHVFRDTANARDRNGQFCSRPGCSSRVNSPKDAKFASSEKGKSSRPPFRSPSRKEAVGSSSGTLPGSYNPGKSPMEARKTLSCQSETVPCETSSLQDESEISELIPPPGKIRKGPQAEGGSSESTNLISMEVGSSSVASKSTYRRNLRQKPGLNGQESNKSSGSVTRAGGNRYGLRNLRCNSISDVIPSGCASSDSTHNRRKDVMKKRNCEGESRSTARGKKMSGPSLDGHNSGSRNGISISDSRRSRNFPPPRDNNNIGSVRTRRSFNGHGRGRLPSQPNENPAPPNESPITISSLPHSSDLNAHDLLHHSSLETPLRSPRSYSRPGSSSERLFGVLPPSPSEYGITRSLMNRDSFLRFNMDGIAEVLLALERIEQDEDLSHEQILLLETNLLLHGLNFYDQHRDMRLDIDNMSYEELLALEERMGSVSTALTEEALSECLKRSFYQPATSDDAAESCNEDKDDIKCSICQEEYVEAEEVGSLKCEHRYHVGCIQQWLRHKNWCPICKAFAAPSHSSSSTSTL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2321 615 MobiDBLite consensus disorder prediction 106 263 - -
Alju07g2321 615 MobiDBLite consensus disorder prediction 209 259 - -
Alju07g2321 615 MobiDBLite consensus disorder prediction 379 393 - -
Alju07g2321 615 FunFam E3 ubiquitin-protein ligase arkadia 521 605 - -
Alju07g2321 615 SMART ring_2 559 599 IPR001841 -
Alju07g2321 615 MobiDBLite consensus disorder prediction 106 123 - -
Alju07g2321 615 MobiDBLite consensus disorder prediction 407 421 - -
Alju07g2321 615 SUPERFAMILY RING/U-box 553 603 - -
Alju07g2321 615 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 160 603 IPR045191 GO:0061630
Alju07g2321 615 MobiDBLite consensus disorder prediction 287 309 - -
Alju07g2321 615 MobiDBLite consensus disorder prediction 145 159 - -
Alju07g2321 615 MobiDBLite consensus disorder prediction 169 191 - -
Alju07g2321 615 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 519 604 IPR013083 -
Alju07g2321 615 MobiDBLite consensus disorder prediction 319 356 - -
Alju07g2321 615 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Alju07g2321 615 MobiDBLite consensus disorder prediction 277 430 - -
Alju07g2321 615 ProSiteProfiles Zinc finger RING-type profile. 559 600 IPR001841 -
Alju07g2321 615 Pfam Ring finger domain 558 600 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2321 Alju-ChrAlju07 49036592 49041865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2321 456 603 C3H Transcription Factor Family AT2G15530 42.953 1.14e-33 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2321 07 49036592 49041865 Alju07g2321 07 49036592 49041865 ECH