Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2313 ATGTTCTCCGGGAGCCAGCTTGATGCCACTGCCGCCTTCTCAGGCGGCGGTTTCATGACCACGGAGTCTACCCAGATCAACGATTCATCTCCGTTACTGGCCAGAAGCCGTGAGACTCAGGGTTTAGTTCCGGTAACAGTAAAGCAGATAAGCGAAGCCTCGCAGTCTGGCGATGAAAAGTCGAATTTCATAATCAACGGCGTGGATGTTACCAATGTAACCTTGGTTGGTATGGTGTTTGAGAAAGTTGACCGAAACACTGACGTTAATTTTGTTCTAGATGATGGAACAGGACGGATCAAATGTCGAAGATGGGTGAATGAGCCTTTTGATACAAAGGAAATGGAAGAAATACGAGATGGCATGTACGTTCGTGTATATGGGCATTTGAAAAGCTTTCAAGGTGTAAAACAGGTTGTTGCTTTCTCAATCAGGCCAGTGATGAGTTTTGATGAGATTTCCTTTCACTTTATTGATTGCATACATAATCATCTACACGCCAAAGCAAAGGTTGAAGGAGTTACTCCTGCTCGTCCTTCATCTATAAACTCATCTCAAGTATCAAATGGAAGTCAAGCACCATCATCTAATCCATTATATGCACAATATAGCATGGATGGGCTTAAGGATTGTGATAAATTGGTCCTTGATTATCTCAATCAGCACTCTGACATGTCTGATGAAAGGGGAATACATGTTAATGAGCTGTCAAGAGAGCTTAAACTTCCATTGGAGAAGATCATGTTGTCACTGAAGGCTCTTGGCGACGATGGACTAGTATACTCCACCATTGATGACAATCATTACAAGCAGGCTTGA 819 0.4298 MFSGSQLDATAAFSGGGFMTTESTQINDSSPLLARSRETQGLVPVTVKQISEASQSGDEKSNFIINGVDVTNVTLVGMVFEKVDRNTDVNFVLDDGTGRIKCRRWVNEPFDTKEMEEIRDGMYVRVYGHLKSFQGVKQVVAFSIRPVMSFDEISFHFIDCIHNHLHAKAKVEGVTPARPSSINSSQVSNGSQAPSSNPLYAQYSMDGLKDCDKLVLDYLNQHSDMSDERGIHVNELSRELKLPLEKIMLSLKALGDDGLVYSTIDDNHYKQA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2313 272 MobiDBLite consensus disorder prediction 176 196 - -
Alju07g2313 272 CDD RPA2_DBD_D 72 165 - -
Alju07g2313 272 SUPERFAMILY "Winged helix" DNA-binding domain 205 270 IPR036390 -
Alju07g2313 272 Gene3D - 202 272 IPR036388 -
Alju07g2313 272 MobiDBLite consensus disorder prediction 177 196 - -
Alju07g2313 272 Pfam OB-fold nucleic acid binding domain 73 146 IPR004365 GO:0003676
Alju07g2313 272 FunFam replication protein A 32 kDa subunit A-like 35 169 - -
Alju07g2313 272 PANTHER REPLICATION PROTEIN A-RELATED 6 270 IPR040260 -
Alju07g2313 272 PIRSF RPA32 1 272 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Alju07g2313 272 SUPERFAMILY Nucleic acid-binding proteins 42 167 IPR012340 -
Alju07g2313 272 Gene3D - 34 168 IPR012340 -
Alju07g2313 272 FunFam Replication protein A 32 kDa subunit 203 272 - -
Alju07g2313 272 Pfam Replication protein A C terminal 179 267 IPR014892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2313 Alju-ChrAlju07 48976271 48979752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2313 1 270 Core DNA Replication Machinery Family AT2G24490 47.292 1.74e-90 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2313 07 48976271 48979752 Alju07g2313 07 48976271 48979752 ECH