Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2304 ATGAATGACAAGAACAGAAATACAGATTTCTTGTCCTTCTCGTCTCTCTCTGTCCGACTCTGGCCCTTTCCCTCTCTTTTTTCATCTGTTCTCTGGAACTTTTCATTCTTTGGCTTCGCCCCCGATAAAAAAAGAGGGGAAAAAAAGAATCCTAAGCGATATTTTATCCGGCAGCTGAGACCCGCTTTTCTTTCTCCCAGGATTCTGTTGCATTCTAGTATGAGTAGGCCAACTACACGAAGTAAAAATAAAAGACAAAGACAAGTCGATGATGGTGCTGGGACTTCTGAAATATGGAGGAGAATTCATGAAACAGGTGTGGTAACTGATGATGATATAAATCAACTTTATATGATTTGGAAGCCAGTCTGTTCGAGCTGCCGTTTTAATACTAAAGACAACCCTAATTGCTTTTGTGCGTTGATTCCACCTCCCAATGGAAACCGGAAATCTGGCTTGTGGCAGAAGGTGTCAGGTATTGTAGACAACCTTGGTCCTGATCCAACCAAGGATCTTCGCGAATCTGCTAACTCACCTGCTGGTCTGACTAATCTTGGGGCCACATGCTATGCCAACAGCATACTGCAGTGCTTGTACATGAATAAATGTTTCCGGGAAGGCATATTTTCTGTAGAACCAGATCTTTTGTTACAGCAGCCAGTGTTAAATCAATTGGTGCGGCTTTTTGTGCAGTTGCACATTAGTAAAAGGGCTTTTGTGGATTCATTTCCATTTGTCAAAACACTGGAGTTAGATAATGGAGTTCAGCAGGATAGCCATGAGTTTTTGACATTGCTTTTGTCTTTGCTGGAGCGTTGTCTAAGCCATTCTAAAGTTCCTAAAGCAAGAACAGTAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACAACCTGCTCACAATGTGGAAGAGACTCTGAAGCATCTTCTAAAATGGAAGACTTCTATGAGCTGGAGTTAAATGTCAAGGGATTTAAAACTTTAGATGAGAGCCTAAATGATTATCTTGCTGTGGAGGAGCTTTGTGGAGATAATCAATATTTTTGCGCATCATGTAAAACAAGAGTGGATGCTACCCGTAGCATCAAGCTGCGCACATTACCTGATGTACTTAATTTTCAACTTAAACGTTGTGTCTTCCTTCCAGAGACTACAACAAGGAAGAAAATTACTTCTGCATTTTCATTTCCAGCTAAGCTTGACATGCAGCCTAGATTGTCTGAGCCATCTCAGTCTGAATTGATTTATGACTTGTCAGCTGTACTGATTCACAAGGGAACTACTGTTAATAGTGGCCATTATGTAGCTCACATTAAGGATGAGCATACTGGGCAATGGTGGGAATTTGATGATGAGCATGTCACTGAGTTAGGCTGTCATCCATTTGGTGATAGATCTTCAAATTCTTCGGTAAAATCTGTTAGGACTGATACTGTTCATTCTGATTCATCTGAAGTAAGGATAGCTGACAGTAATGGAAATGGTCCGGATGCTTCTCACTCACAATCTTCTCTTGTGGAGACATTTTCATCAAGTGATGCATACATGTTGATGTACAATCTTAAGCATACCAAAAATGAAGTCAAAATGGGTGATGTGCTCAGCAATGGTGATGCTGTTCCTGCACGAGATAGATTTCCTCTTTTATCTCATCTTTTTGATGAGATTCAGAACCTTAATGCTTCATATGTTGATGAGTGTGCACAGTACAATCAAAGGAAAGAGTTAGAACTGAGTCGAATCACTGCAAGGAGACAAGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTCAACCACTTGAGCAACCGTTTTATTGGATTTCTAGTGACTGGCTTCGCCAGTGGACTGACAACATTAATCCAAGCACTCTTGACAATACTTCCATTCAATGCTCACATGGGAAAGTTCCTGTATCCAAGGTTACTTCAATGAAGCGATTGTCAGATAAAGCATGGGATAAATTGTTTTCAAAGTATGGTGGGGGGCCTACACTATCCCATAGTGATTGTTGTTGGGATTGTCTTATTGATGGAGCTCGCTTTGTGGTGTCAGCTGACACCTATCGTGACCGAAGAGAATCAATGAAGCAACTTGCACGGGACATTCTTGACAGAAACTGTCCAGATGGAAAGTATTATGTATCTAGACCATGGTTGCAACAGTGGTGGAAAAGAAAAGTACTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCATCAATTAGTTGCCCACATGGGCAACTTTTACCTGAGCAAGCTGCTGGTGCTAAGCGGGTGCTTGTTCCTGAGAGCTTTTGGCACTTCTTATATGAAGATGCTCTTTCTCTAAAACCTGATGATCCTTTGGCTTGCCCAACATTTCCTTCAGATTCAGTGCCTTGTTCCCAATGCAGCGATGAATTATCTGAAGTAGCATGCTTGGAGGACTCTTTAAAATTAGTGAAGCAAGTGCAACGTCAGAATCATGAGAAATTATTACTGGCTAAAAGTATGCCTCTCTCGTTGCATTGCAAATATTTCCTAGTGCCTTCTTCTTGGATTTCAAAATGGAGGAGTTACATGAGTTCCTCTGTCAAGAATTCAGACAAACCTGAAACTTTAGATGGGATAATCAATTCCCTTATGTGTGAAAAGCACTCCCTTCTTGTGGAAAAGCCCCTTGAACTGGTTTTCAGACGCGGTGCTATAGTCCAGCGAGAATATTCTGCAGGTGGTTTAACTATGATATCTGAGAATGATTGGAAATGCTTTTGTGAGGAATGGGGTGGTACTGAGACGAAAGGTATATCAGCAACAATTGAGAATATCAGTGATTCAGAAAATATTTTGACTGGATTCAGCTCAGAGACACCGATATGTGAAGATCAGTTGAATGATAAAGTGAATAATGATAGCGGGACTAGTAAGCTGGTGATTAAGACTTGTCCAGAGATTTGTGAAAGTTGCATTGGAGAAAGGGAAAGCTGTGAGCTAATGCAGAAACTTAACTATAGCAATGAGAACATATCTGTGATTCTTGTAAGGGGGAAGGAAGTTCCGAGATCAATATTAGAGGCTTCAAAGGGCTCAGTTGAAACAGATAGACGTGTTTCCAAGCGCTCCCGGAAATCTAAAAATGGGACTTCGATAAGTCTTAAAGTTTCTGCTTCAACATCGCTGTACCAGCTAAAAATGATGATATGGGAGGCCTTTGGGGTTGTAAAGGAAAACCAGATATTACAGAAAGGTGACAGGACAATTGATAATGAGGATGAGTGTGCTACGCTTGCAGACGTAAACATATTTGCTGGAGATCAGATTATAGTGAGGGACTCGGAGATCCATGAAAATAGAGATATTGCTGATGAGATTTGTGATGATAAAATGGAGATGCAGCGGAGTGAGGGAGGGTTTCGTGGAACACTTCTGACAGCAGACGTTTCATCTCAGGTTGTTTGA 3444 0.4129 MNDKNRNTDFLSFSSLSVRLWPFPSLFSSVLWNFSFFGFAPDKKRGEKKNPKRYFIRQLRPAFLSPRILLHSSMSRPTTRSKNKRQRQVDDGAGTSEIWRRIHETGVVTDDDINQLYMIWKPVCSSCRFNTKDNPNCFCALIPPPNGNRKSGLWQKVSGIVDNLGPDPTKDLRESANSPAGLTNLGATCYANSILQCLYMNKCFREGIFSVEPDLLLQQPVLNQLVRLFVQLHISKRAFVDSFPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTVVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGFKTLDESLNDYLAVEELCGDNQYFCASCKTRVDATRSIKLRTLPDVLNFQLKRCVFLPETTTRKKITSAFSFPAKLDMQPRLSEPSQSELIYDLSAVLIHKGTTVNSGHYVAHIKDEHTGQWWEFDDEHVTELGCHPFGDRSSNSSVKSVRTDTVHSDSSEVRIADSNGNGPDASHSQSSLVETFSSSDAYMLMYNLKHTKNEVKMGDVLSNGDAVPARDRFPLLSHLFDEIQNLNASYVDECAQYNQRKELELSRITARRQEVRSVLAEAPVQPLEQPFYWISSDWLRQWTDNINPSTLDNTSIQCSHGKVPVSKVTSMKRLSDKAWDKLFSKYGGGPTLSHSDCCWDCLIDGARFVVSADTYRDRRESMKQLARDILDRNCPDGKYYVSRPWLQQWWKRKVLDAPSEADAGPTASISCPHGQLLPEQAAGAKRVLVPESFWHFLYEDALSLKPDDPLACPTFPSDSVPCSQCSDELSEVACLEDSLKLVKQVQRQNHEKLLLAKSMPLSLHCKYFLVPSSWISKWRSYMSSSVKNSDKPETLDGIINSLMCEKHSLLVEKPLELVFRRGAIVQREYSAGGLTMISENDWKCFCEEWGGTETKGISATIENISDSENILTGFSSETPICEDQLNDKVNNDSGTSKLVIKTCPEICESCIGERESCELMQKLNYSNENISVILVRGKEVPRSILEASKGSVETDRRVSKRSRKSKNGTSISLKVSASTSLYQLKMMIWEAFGVVKENQILQKGDRTIDNEDECATLADVNIFAGDQIIVRDSEIHENRDIADEICDDKMEMQRSEGGFRGTLLTADVSSQVV 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2304 1147 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 417 435 IPR018200 GO:0004843|GO:0006511
Alju07g2304 1147 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 128 523 - -
Alju07g2304 1147 Gene3D Cysteine proteinases 166 523 - -
Alju07g2304 1147 Pfam Ubiquitin carboxyl-terminal hydrolase 181 520 IPR001394 GO:0004843|GO:0016579
Alju07g2304 1147 SMART dusp 598 674 IPR006615 GO:0004843
Alju07g2304 1147 Gene3D - 1036 1107 - -
Alju07g2304 1147 FunFam ubiquitin carboxyl-terminal hydrolase 48 167 523 - -
Alju07g2304 1147 MobiDBLite consensus disorder prediction 466 503 - -
Alju07g2304 1147 SUPERFAMILY Cysteine proteinases 177 527 IPR038765 -
Alju07g2304 1147 SUPERFAMILY DUSP-like 585 671 IPR035927 -
Alju07g2304 1147 CDD Ubl_USP48 1037 1138 IPR044743 GO:0004197|GO:0004843|GO:0016579
Alju07g2304 1147 ProSiteProfiles DUSP domain profile. 580 672 IPR006615 GO:0004843
Alju07g2304 1147 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 180 523 IPR028889 -
Alju07g2304 1147 SUPERFAMILY DUSP-like 708 773 IPR035927 -
Alju07g2304 1147 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 181 196 IPR018200 GO:0004843|GO:0006511
Alju07g2304 1147 SUPERFAMILY Ubiquitin-like 1039 1105 IPR029071 -
Alju07g2304 1147 ProSiteProfiles DUSP domain profile. 815 935 IPR006615 GO:0004843
Alju07g2304 1147 Gene3D - 811 931 IPR035927 -
Alju07g2304 1147 FunFam Ubiquitin carboxyl-terminal hydrolase 26 571 669 - -
Alju07g2304 1147 CDD Peptidase_C19L 181 520 IPR033841 GO:0004843
Alju07g2304 1147 ProSiteProfiles DUSP domain profile. 687 789 IPR006615 GO:0004843
Alju07g2304 1147 MobiDBLite consensus disorder prediction 486 503 - -
Alju07g2304 1147 Gene3D - 572 670 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2304 Alju-ChrAlju07 48910003 48919600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2304 178 455 Miscellaneous Gene Families AT4G31670 29.836 1.51e-26 114