Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2293 ATGATCGTCAAAATTAAGTCAATGAGTCAAAATAAGGCACCATTACCATTACTAATTAGAAGGCGTTCCAGTGATGAAATCAGAAACTTGACCTTGGCCTCAGCCTCAAGCGACCTCTTACCAGCATTTGGCGCCAACACTGTTGACGAGAATCGCCTAAACCTTAAAAAATATGTTATCGCTCCCTCTGATCATAGATATCGGCTGTGGCAGACATTCCTTGTTGCATTGATGGTATACTCTGCATGGGCATCTCCATTCGAGCTGGCTTTCGCAGAAGTGGCAGTTGGGTCGTTGTGGCCAGTTGATCTGCTCATTGATGCCTTCTTCGCCGTTGATATAGTCCTAACTTTCTTTGTGGCTTACTTGGACAAATCAACCTATCTCCTCGTTGAACACCACAAGAAGATCGCAATTAGGTACATGAGAAAGTTATATTTTCCCATGGACGTTGCAGCAACTCTGCCATTTCTGCAGATATACCAAATCCAAAAGGGCAGAACATTCGAGGGCGAGGTCTTTGGCTTCCTAAGTATGCTCAGGCTTTGGCGATTAAGGCATGTTAGCCAACTTTTTGCAAGGCTAGAGAAGGACATACGAATTAGCTACTCGGCCACAAGATTTTGCAAACTTATATGCGTAACGCTATTTGTAGCGCACTTCGCAGGCTGCATGTATTATTGGATGGCTGCCCACCACAAAACACCTGAGAACACATGGATTGGGAAGCCGATGCCAGATTTCAAACAAAGGAGTGTCTGGCTGAGATACACCTATTCCATATATTGGTCTATGGTCACTCTTACCACAGTAGGCTATGGAGATTTTTGTGCTGTGAATATGGGCGAGAAAATCTTCACGGTCTTATATATGCTATTTAACATTGGCTTCAGTGCATATATAATTGGAAACATAACAACTCTGGTCGTCCATGGCACTGTCCGGACTTTTGCCCTGAGGGATGCCATCAATCAAACACGAAAATATGCAAGCAAAAGTAGACTCCCAGAAGGCTTGAAAGAACAGATGCTGGCACAAATTCAATTGAAATTTAAAACAGCAGAGGTACAGCAAGAAAAAGTGCTACAAGACCTGCCCAAGGCTATCAGATCGAGTATTGCTCAGCATCTTTTCCGTGACATAGTTGAAAGTGCATATTTATTTGAAGGAGTCTCTGATCATTTTATCACCCAATTGGTGTCAGAACTCAAAGCAGAATATTACCCACCTAAGGTTGACATTATCTTGCAAAACGAGATGCCGTCATATTTCTATATTTTGGTATCTGGAGCAATGGATGTATTGACCAACGAGAATGGAACTGAACAGCTATTGTTGAAGCTAGAAGGTGAAGGGATGGCAGGAGAAATAGGAGTCATGTTTAATATCCCCCAAACTTTCACAGTGAGATGTAGGAGGCTTTGTCAAGTTATCCGAATTAGCCATTATCGTTTCAAGCAGATGCTGCAACCATACAGTGATGATGGGAAAGCAATTATCACCAACTTCAATCAGTACTTGAAGGGCTTAGAGAAAAGGGTGCCAGACGAAATTCCTTATCTGACAGCATTGTTGAGTAACTTTCAATTTGAGATAACACAAGAACAAGGCATATATGGTGAAGGTTTAAATTATGATGAAGATGAACCATATAAACAAGGAAAGAAAGGAAATTCTAAACCATCGTCTAGCCTAGTCCCACCTAGAGTGAGAATTCATGGACATCATCCTAAAGAGAATAGAATGGAAAATCAAACCTCACAGGAACTCATACTTCTCCCAGATACAATGGAAGAACTTTTCAAATTAGCAGAGAAGAAGTTTGGGAAAAGAGGAAGCAAGATTCTTATGGCTGATGGCTCAGAAGTAGAAAATCTAAGCGTCCTAAGAGAGAACGATGAGTTGTACATCTTCTAA 1917 0.4158 MIVKIKSMSQNKAPLPLLIRRRSSDEIRNLTLASASSDLLPAFGANTVDENRLNLKKYVIAPSDHRYRLWQTFLVALMVYSAWASPFELAFAEVAVGSLWPVDLLIDAFFAVDIVLTFFVAYLDKSTYLLVEHHKKIAIRYMRKLYFPMDVAATLPFLQIYQIQKGRTFEGEVFGFLSMLRLWRLRHVSQLFARLEKDIRISYSATRFCKLICVTLFVAHFAGCMYYWMAAHHKTPENTWIGKPMPDFKQRSVWLRYTYSIYWSMVTLTTVGYGDFCAVNMGEKIFTVLYMLFNIGFSAYIIGNITTLVVHGTVRTFALRDAINQTRKYASKSRLPEGLKEQMLAQIQLKFKTAEVQQEKVLQDLPKAIRSSIAQHLFRDIVESAYLFEGVSDHFITQLVSELKAEYYPPKVDIILQNEMPSYFYILVSGAMDVLTNENGTEQLLLKLEGEGMAGEIGVMFNIPQTFTVRCRRLCQVIRISHYRFKQMLQPYSDDGKAIITNFNQYLKGLEKRVPDEIPYLTALLSNFQFEITQEQGIYGEGLNYDEDEPYKQGKKGNSKPSSSLVPPRVRIHGHHPKENRMENQTSQELILLPDTMEELFKLAEKKFGKRGSKILMADGSEVENLSVLRENDELYIF 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2293 638 ProSiteProfiles KHA domain profile. 569 638 IPR021789 -
Alju07g2293 638 SMART cnmp_10 387 504 IPR000595 -
Alju07g2293 638 Pfam Cyclic nucleotide-binding domain 407 490 IPR000595 -
Alju07g2293 638 CDD CAP_ED 387 500 IPR000595 -
Alju07g2293 638 PANTHER POTASSIUM CHANNEL AKT1 33 512 IPR045319 GO:0005249|GO:0006813
Alju07g2293 638 Pfam KHA, dimerisation domain of potassium ion channel 568 637 IPR021789 -
Alju07g2293 638 Gene3D Jelly Rolls 333 512 IPR014710 -
Alju07g2293 638 SUPERFAMILY Voltage-gated potassium channels 62 309 - -
Alju07g2293 638 PRINTS EAG/ELK/ERG potassium channel family signature 103 113 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju07g2293 638 PRINTS EAG/ELK/ERG potassium channel family signature 301 310 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju07g2293 638 PRINTS EAG/ELK/ERG potassium channel family signature 257 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju07g2293 638 PRINTS EAG/ELK/ERG potassium channel family signature 283 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju07g2293 638 PRINTS EAG/ELK/ERG potassium channel family signature 114 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju07g2293 638 Gene3D - 68 310 - -
Alju07g2293 638 FunFam Potassium channel KAT3 69 311 - -
Alju07g2293 638 Pfam Ion transport protein 68 315 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju07g2293 638 ProSiteProfiles cAMP/cGMP binding motif profile. 387 506 IPR000595 -
Alju07g2293 638 SUPERFAMILY cAMP-binding domain-like 316 506 IPR018490 -
Alju07g2293 638 FunFam Potassium channel KAT2 375 511 - -
Alju07g2293 638 MobiDBLite consensus disorder prediction 543 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2293 Alju-ChrAlju07 48792124 48799710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2293 7 638 Ion Channels AT4G32650 54.773 0.0 677