Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2281 ATGGAAATTTGGCTGCCCACTTTTGTACAGATTTTTTTATGCTCTTCTTCCCTGCTCCACCCCCATCCTCACCCTCTCGGGACGATAAATGAGTTTCAAATGTTAATATGTGAAGAGAAATTGGTCAAATAGATGAAAGAAGATGAGAAAATTGAAAGAGAAATTCGAAGTCTCGCAAAACTTCCTGAAAATAGGAGATGTATCAACTGCAATAGTTTGGGACCACAATATGTCTGCACAACCTTTTGGACATTCGTCTGCACAAACTGCAGCGGAATTCAACGAGAGTATAACCACAGAGTAAAATCAGTATCAATGGCTAAATTTACTGCTGAAGAAGTCTCTGCTCTTCAGGCAGGCGGCAATGAAAGAGCAAAGCAGATTTATTTTAAAGACTGGGATCCTCATCGTCAGTCTTATCCCGATACCAATAACATTCGAAGACTTCGCGATTTCATCAAGCAAGTCTACGTGGATAGAAAATTCACTGGTGAAAGGACCCAAAATAATCTTCCCAGACTCAGATTGAATGACAAGGAGGAGTCCTACGACGGCAGGAAGCTCAGTTTTTCCCTAAGGGAACGATATGAAGATAGAAATGATATGCGTAGTCCTAGTTCACGAGACGGGGACAGGAGTGTCAAATTTTATTATGATGACAGAAGAAGTCCTAGATATGTGCCGAGGAACGGGAACAACAGGAGAAATACTGTAAAAATTGAGGTTGTTGATGATAGGTTCCGAGACGATAAATCTAGAACCCGCAGGTTTTTGAGCGTAGAATCAAAGGAAACAGCGGTTTCCTCTGATGCACAAAAGAACGGGGACGGAGAGAAGGGTGCACCTGCCAGTGGAGAGGGATCCGTTAAGGAGAATCCAGATGAACAAAAAAGCCCAGAAAATGCAACTGAAGCTGCAACTGCATCGGAAGCTCAGTCTACATCTCAATCAAATGATGGAAGTGACTGGGCACCATTTGAAATTTCCACAGAAAATGAGTCTTCTCAAACCCCAAACAAGTGTTTCCCAACAGAGACAACAACTTCTACAACAGAGACAAAGCCTAAAACTTTAGATGCTATAGAATTCTTACTATCTGAATTGTCTGGTCCCTTGTATGCGACACCTAGTAGCATGTCTAATGTTCACGCTGCTGATAACGATGCTTCAGCTGCAAGAGTTGAAGATATCTCCGTGGATGTGGATTTAGCACCGCCGACCTCAGAAGGCCAGATAACTCCATCTCCCAACAATGTTGGTGCTTCCTCAGTTAAATCAATCAGTGATTCTGATCTGACGCAACCCTCAACAGCTTGCAGCTCAGTGACACAATCAATGAGTACATCATTCAGAGATGTCACTTCGCTTGATCAGCCAGAAGAAGTTACTGCTGAAGTGGAAGACCTTTCAAACTCTGCTATGGAACTATCTCTTCAAGCCGAGCCAGAAGCTGCTCAAGACACCGGATCTAATGTCAGATCCCAACCTTGGATAATAGAAACCAAGTCTAATGGAAGAAACGAACTTCCGGAGGATCTCTTTACTTCGACCTACTTACCAGCCTCTGCACCGCAAGCAGGCTGGCAGAATTTTCGACCTCATAATATGGGATACGGCTTGCAGTATTACTCTAATGTAGCACCAATCTTGGCATTTCCTACTGCAGCAAAGTCCACAAACCCTTTTGATATAACTGAGGGCAGACCTCAAGTGCATGCTTCTCCATTTCCTACTATAGCAAATTTGCATGGTGCCCAAACTGCTATGTCAAATGGAGCAGCATTAATGCGTGCTTCAAGCTTTGGGGCTTTAGGGTCGATGGTGCCTCAATCCCCAAATTATGCATCTTCAATGCCTCCACAGTCTTCCTTTACTCCTGGCTTTCCAGCTGGTGCATACTTTGAGCAAGTTAACAATAATAATATGCAAGCTCCCAGACCTCGAAGAGCTGGCAGCTTCAATGGTGAAACAACCTTCCAACATTCAGCTGGCGGGTATATGGCTCCCGGCTACACTCTAAATTCTTTCCCCAAGACTGGAGGTGGAAATCCATTTGGATAG 2061 0.4386 MEIWLPTFVQIFLCSSSLLHPHPHPLGTINEFQMLICEEKLVKXMKEDEKIEREIRSLAKLPENRRCINCNSLGPQYVCTTFWTFVCTNCSGIQREYNHRVKSVSMAKFTAEEVSALQAGGNERAKQIYFKDWDPHRQSYPDTNNIRRLRDFIKQVYVDRKFTGERTQNNLPRLRLNDKEESYDGRKLSFSLRERYEDRNDMRSPSSRDGDRSVKFYYDDRRSPRYVPRNGNNRRNTVKIEVVDDRFRDDKSRTRRFLSVESKETAVSSDAQKNGDGEKGAPASGEGSVKENPDEQKSPENATEAATASEAQSTSQSNDGSDWAPFEISTENESSQTPNKCFPTETTTSTTETKPKTLDAIEFLLSELSGPLYATPSSMSNVHAADNDASAARVEDISVDVDLAPPTSEGQITPSPNNVGASSVKSISDSDLTQPSTACSSVTQSMSTSFRDVTSLDQPEEVTAEVEDLSNSAMELSLQAEPEAAQDTGSNVRSQPWIIETKSNGRNELPEDLFTSTYLPASAPQAGWQNFRPHNMGYGLQYYSNVAPILAFPTAAKSTNPFDITEGRPQVHASPFPTIANLHGAQTAMSNGAALMRASSFGALGSMVPQSPNYASSMPPQSSFTPGFPAGAYFEQVNNNNMQAPRPRRAGSFNGETTFQHSAGGYMAPGYTLNSFPKTGGGNPFG 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2281 686 Gene3D Arf GTPase activating protein 42 173 IPR038508 -
Alju07g2281 686 SUPERFAMILY ArfGap/RecO-like zinc finger 52 163 IPR037278 -
Alju07g2281 686 MobiDBLite consensus disorder prediction 402 440 - -
Alju07g2281 686 ProSiteProfiles ARF GTPase-activating proteins domain profile. 49 170 IPR001164 GO:0005096
Alju07g2281 686 Pfam Putative GTPase activating protein for Arf 53 164 IPR001164 GO:0005096
Alju07g2281 686 MobiDBLite consensus disorder prediction 199 234 - -
Alju07g2281 686 MobiDBLite consensus disorder prediction 299 354 - -
Alju07g2281 686 FunFam Arf-GAP domain and FG repeat-containing protein 1 41 174 - -
Alju07g2281 686 PRINTS HIV Rev interacting protein signature 101 122 IPR001164 GO:0005096
Alju07g2281 686 PRINTS HIV Rev interacting protein signature 64 83 IPR001164 GO:0005096
Alju07g2281 686 PRINTS HIV Rev interacting protein signature 83 100 IPR001164 GO:0005096
Alju07g2281 686 MobiDBLite consensus disorder prediction 199 227 - -
Alju07g2281 686 MobiDBLite consensus disorder prediction 258 354 - -
Alju07g2281 686 CDD ArfGap_AGFG 52 162 - -
Alju07g2281 686 SMART arf_gap_3 52 170 IPR001164 GO:0005096
Alju07g2281 686 PANTHER ARFGAP/RECO-RELATED 291 686 IPR044820 GO:0005096
Alju07g2281 686 MobiDBLite consensus disorder prediction 408 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2281 Alju-ChrAlju07 48695452 48702607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2281 52 162 C2H2 Transcription Factor Family AT4G05330 32.759 1.10e-11 65.1