Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2279 ATGCCTGTCAAATCGGCCCAATCATCGTTTCGGGATCGGACACAGGAATTTCAGAGTATAGCAGAGAGGCTAAAGAAGTCAGTGTCGTCCGGATCAGGGCCAAACGGGCCAAGCAGTAGTTCAAGATCAGAGGAACAGCGATCTGCGATCGCAATTCAGTCAGAATTCAATAGGAGGGCTTCCAAGATTGGTTATGGGATACATCAGACGTCACAGAAGCTTGCTAAGCTGGCCAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCCACTATGGAAATTCAAGAGCTCACAGCAGTTATTAAGCAAGATATCACTGCATTGAACTCTGCCGTTGTGGGACTGCAGCTAATCAGCAACGCTAGAAATGACAGTGGAAATATCTCCAGTGACACAACTAGTCATTCAACCACAGTTGTGGATGACCTTAAAACCCGATTGATGAGCACCACAAAAGAGTTTAAAGAAGTCCTCACCATGCGAACAGAGAACTTGAAGGTACATGAGAATAGAAGACAGCTGTTTTCTTCCACTGCCTCTAAGGAAGCTGCGAATCCTTTTGTCCGCCAACGTCCCCTGGCTGCAAAGTCAGCTTCCAATGCCCCTGCACCCCCATGGGCTAGTGGGTCAACGTCTTCATCTCAGTTGTTTCCAAAGAAGCAAGTGGATGGGGAGGGTCAACCATTGTTGCAGCAGCAACAGCAGCAATTGGTTCCATTGCAGGATTCATACATGCAAAGCAGAGCTGAAGCTCTACAGAATGTTGAGTCCACTATTCATGAGTTGAGCAGCATTTTTAATCAATTGGCAACACTCGTCTCCCAACAAGGGGAAATTGCCATCAGGATTGATGAGAACATGGACGATACGTTGGCAAATGTAGAAGGGGCGCAGGGGGCTTTGCTCAAATATCTGAACAGTATATCTTCTAATAGGTGGCTGATGATCAAGATATTCTTTGTATTAATATTTTTTCTCATGGTTTTCCTATTTTTTGTGGCATAA 1005 0.4537 MPVKSAQSSFRDRTQEFQSIAERLKKSVSSGSGPNGPSSSSRSEEQRSAIAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVGLQLISNARNDSGNISSDTTSHSTTVVDDLKTRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKEAANPFVRQRPLAAKSASNAPAPPWASGSTSSSQLFPKKQVDGEGQPLLQQQQQQLVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2279 334 MobiDBLite consensus disorder prediction 193 221 - -
Alju07g2279 334 FunFam Syntaxin-32 like 50 297 - -
Alju07g2279 334 SMART tSNARE_6 237 304 IPR000727 -
Alju07g2279 334 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Alju07g2279 334 ProSitePatterns Syntaxin / epimorphin family signature. 248 287 IPR006012 GO:0005484|GO:0006886|GO:0016020
Alju07g2279 334 CDD SNARE_syntaxin5 245 323 - -
Alju07g2279 334 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 242 304 IPR000727 -
Alju07g2279 334 Pfam SNARE domain 278 330 IPR000727 -
Alju07g2279 334 MobiDBLite consensus disorder prediction 23 47 - -
Alju07g2279 334 Gene3D - 51 297 - -
Alju07g2279 334 PANTHER SYNTAXIN 50 326 IPR045242 -
Alju07g2279 334 SUPERFAMILY t-snare proteins 54 297 IPR010989 GO:0016020|GO:0016192
Alju07g2279 334 MobiDBLite consensus disorder prediction 203 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2279 Alju-ChrAlju07 48664087 48668133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2279 1 334 SNARE and Associated Proteins AT3G24350 64.820 3.14e-149 422