Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2271 ATGAGTTTGGCTTGCTGCATCTGCCTGACAATGTATGAAGACAACGATGAGTTAAGAGAATTGGCTTGTTCTCATCTTTTTCACAAAGATTGTGTAGATAAGTGGCTGAAGATAAATGCATTATGCCCTCTTTGCAAGGATGAGGTTGGTGAGGTCGAGAATGCAAGAGGATCATCAGGCTCCGTAGAAGATGCAGGCCAGCGGGTTGAAAATATATAG 219 0.4292 MSLACCICLTMYEDNDELRELACSHLFHKDCVDKWLKINALCPLCKDEVGEVENARGSSGSVEDAGQRVENI 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2271 72 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Alju07g2271 72 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 4 49 - -
Alju07g2271 72 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 62 IPR013083 -
Alju07g2271 72 Pfam Ring finger domain 4 46 IPR001841 -
Alju07g2271 72 SMART ring_2 5 45 IPR001841 -
Alju07g2271 72 SUPERFAMILY RING/U-box 4 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2271 Alju-ChrAlju07 48618080 48618351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2271 4 55 C3H Transcription Factor Family AT1G80400 71.154 6.93e-24 90.5