Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2267 ATGGATTATCCTAGGGGAATAATCTTCCTGGTTTTTCTTTCAACAAATGTAGGTAATGCGCTGCTGGGCCTGAGACTGGAGCTGAAGCTGGAGTTGGAAGAGCTCAGCATCGTCCTGATGGATGTGAATGCAGTTCCCGCCCGTGATCCTGTTGACAGTTATATGAACTACCGCTATGAACTGAATAATATCTTAATTCGGAAGAAATTGACAAACAACTTTTTGCTTTCATTCTCTCTCTCAATTGGACCCGATTCCTCTTATTTATTTATTTTTTTTAACCTTTCGTTGAGATCTTGCTCTGTTCTGCTTTGCTCTCACTCCTCCCGTGTGTGTGTGTGTGTAAGAGAGACTGTGGAGCAGCAGCAGCTTAGCTATGCAAAGCGAGATGGGTATCAGATGGCCATGCTGATAATGGCACAGCCTAACAATGGCAATCACAGTTCGAGCCAACAGTCAGTGAAATCAGTCTTTCATGACTTTATGGGCATGAAGCCCACTGATTCGCCCCTCGTTGCGGCCCCTAAAACCACTGAAGCGAGGCCGTTGGAGGCGTCGCCATCGGTCTCTGTTGGCGCCTCTTCCGGTGTTGCCCGTGGCCCCCTCTCAACCATCTCTGATATCGCTTCTGAAAGACAGTTAGGAAATCACCTCGAGGGAGTCCCGTTCTATTGCCCGAGGAGTGATCTTTCTGGCACTGAGATTAGTAACAGAATACTAGGAAACAAGAGAAGTAATTCTGATTCCAGTTTTATGAGTTCCTCCAGAGATGCCTTCCAAATGGTTCCTGACTCTCTTCAAAATTCGCATTTATTGAAGTCAAGGAAGCCAACTTCTGCTTCTCTCATATATCAGCCTTCAACGGGCACTAAGATTGATTTCAATAAATGGGAGCGATCTATTCTCATGAATACTGGCTCTTCCATGCAGCATCCACCACATGGGGGTCAATTAGCATCTTTTGTGCATCAGATATCTTCTAACAAGAGCAGGGATGCTAATGCTGGTCCTTCATTTATTTCTCAATCTGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCCTGGGATCTTGAGTTCTATGAACACTACCACTGCTGCTTATGAGAAATCTCTGTCTGCACTTGGCGGAAGCAGGCCAAAACCATTGACCAGTATAATAGACCCAGAATCTTCCATGCCTCCAAGTCAACAAGGGTTAGCATCTGCCAGCTGCCAGATGACTATTTTTTATGGAGGTCAAGCTCACGTTTTTTATAATGTCCATCCCAATAAGGCAGAAATTATAATGGCTCTAGCTGGGTCAAATGGTGGATGTTGGTCCACAACATACTCCCCAAAACCTGCTGCGAAGCTCACTAATGACAGTAACATGCTGTGTGGAGATAGTGAAACTGGTATAGTGAGTAAGATTACGGCCCCACGGGAGCCTCATGGCAGATTATCTTTCTCCGGCACTTCTAGTCTTGCCATCAAATCTGGCAATCGACTGTCTACTCAGGCAGGGGCACATCAGGGAAGCTTTGTAGCCAAAGAAGATGTTAGGAATTCAATTAAAGCATCAGATCACAGTTCTGAGGAGAAAAGGACGCAATCACATTGA 1605 0.4548 MDYPRGIIFLVFLSTNVGNALLGLRLELKLELEELSIVLMDVNAVPARDPVDSYMNYRYELNNILIRKKLTNNFLLSFSLSIGPDSSYLFIFFNLSLRSCSVLLCSHSSRVCVCVRETVEQQQLSYAKRDGYQMAMLIMAQPNNGNHSSSQQSVKSVFHDFMGMKPTDSPLVAAPKTTEARPLEASPSVSVGASSGVARGPLSTISDIASERQLGNHLEGVPFYCPRSDLSGTEISNRILGNKRSNSDSSFMSSSRDAFQMVPDSLQNSHLLKSRKPTSASLIYQPSTGTKIDFNKWERSILMNTGSSMQHPPHGGQLASFVHQISSNKSRDANAGPSFISQSAADEGSRTGIKGPGILSSMNTTTAAYEKSLSALGGSRPKPLTSIIDPESSMPPSQQGLASASCQMTIFYGGQAHVFYNVHPNKAEIIMALAGSNGGCWSTTYSPKPAAKLTNDSNMLCGDSETGIVSKITAPREPHGRLSFSGTSSLAIKSGNRLSTQAGAHQGSFVAKEDVRNSIKASDHSSEEKRTQSH 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2267 534 Pfam tify domain 403 435 IPR010399 -
Alju07g2267 534 ProSiteProfiles Tify domain profile. 401 436 IPR010399 -
Alju07g2267 534 MobiDBLite consensus disorder prediction 499 534 - -
Alju07g2267 534 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 231 478 IPR040390 -
Alju07g2267 534 MobiDBLite consensus disorder prediction 340 359 - -
Alju07g2267 534 MobiDBLite consensus disorder prediction 516 534 - -
Alju07g2267 534 SMART tify_2 401 436 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2267 Alju-ChrAlju07 48590592 48597367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2267 155 503 Tify Gene Family AT4G32570 40.984 1.08e-50 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju07g2267 tify 8e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2267 07 48590592 48597367 Alju08g0765 08 5693709 5698949 CCT