Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2258 ATGGAGGAGAATGAACAGCATAAAAGCAGTGGATTCATGAGTTCCGGTGAGAGTCGTCCTCCGAATCCGTTCGCTGCTGAATACCGACAATGCCCCAGCTCCGACCGTGGGGCGGCACCAAGTAAGAGGTCCCTTGTTCGGCACCCTTCTCTTACGAAGACAAAGGTGTCTGAAGTATCTGCTGAGCCAGAACATGATATTGAGGATTGCAAGTCTGAGTTCCTTCCAAACCTTCGTTCTGGAGCATGTGCTGATATTGGGTTCCGTTCAAGCATGGAAGACGTGTATTTGTGCGTGGACAACTTTTTGCCAAATTTTGGACCCAGGAACCACATAGATGGACCCAGTGCATTTTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGTCATCATTTGCCAAAGTTTATTGTTGAGGATGAAAGCTTTCCGAGTGATATTGAAAAGATTGTTGCATCAGCATATTTGCAGACAGACAATGCTTTTGCTGAAGCTTGTTCTCTTGATGCTGACCTTGCATCTGGCACCACTGCTCTGGCTACTCTTGTCGTTGGAAGGTTGTTGTTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGTCGCCGTGGAAAAGCTATTGAAATGTCAAGGGATCACAAACCAACGCATAGCAAAGAGAAGAAGCGCATTGAGGCATCAGGAGGTTATGTGTATGATGGGTATCTCAATGGACAGCTCAATGTAGCCCGTGCTCTAGGTGATTGGCACATGGAAGGAATAAAAGTCAGAGATGGTGGACCTCTCAGTGCAGAGCCTGAACTTATGACCACAAATCTGACTGAAGAGGATGAATTTCTCATCATGGGCTGTGATGGGATTTGGGATGTTTTTAGGAGCCAAAATGCTGTGGATTTTGCTAGGCGAAGGCTTCAAGAGCATAACGATCCAGCCAGGTGTAGTAAGGATTTGGTTGATGAGGCTTTGAAGAGAAAGAGTGGAGACAATCTAGCAGTGGTTGTGGTTTGCTTTCAGCAGCAGCCTCCGCCTAACTTGGTGGCACCGCGTTCTAGAGTGCACAGGAGCTTCTCTGCTGAAGGCTTGAGAGAGTTGCAAAGCTTCCTGGATAGTTTGGGTAATTGA 1137 0.4714 MEENEQHKSSGFMSSGESRPPNPFAAEYRQCPSSDRGAAPSKRSLVRHPSLTKTKVSEVSAEPEHDIEDCKSEFLPNLRSGACADIGFRSSMEDVYLCVDNFLPNFGPRNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVEDESFPSDIEKIVASAYLQTDNAFAEACSLDADLASGTTALATLVVGRLLLVANAGDCRAVLCRRGKAIEMSRDHKPTHSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHMEGIKVRDGGPLSAEPELMTTNLTEEDEFLIMGCDGIWDVFRSQNAVDFARRRLQEHNDPARCSKDLVDEALKRKSGDNLAVVVVCFQQQPPPNLVAPRSRVHRSFSAEGLRELQSFLDSLGN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2258 378 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Alju07g2258 378 Gene3D - 56 346 IPR036457 -
Alju07g2258 378 PANTHER PROTEIN PHOSPHATASE 2C 61 340 IPR015655 GO:0004722|GO:0006470
Alju07g2258 378 CDD PP2Cc 79 342 IPR001932 -
Alju07g2258 378 MobiDBLite consensus disorder prediction 1 64 - -
Alju07g2258 378 FunFam Probable protein phosphatase 2C 22 62 345 - -
Alju07g2258 378 SUPERFAMILY PP2C-like 73 344 IPR036457 -
Alju07g2258 378 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Alju07g2258 378 Pfam Protein phosphatase 2C 81 334 IPR001932 -
Alju07g2258 378 SMART PP2C_4 69 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2258 Alju-ChrAlju07 48515563 48518181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2258 14 378 PP2C-type Phosphatase Gene Family AT2G25620 71.164 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Alju07g2258 PP2C 1.2e-71 CL0238