Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2246 ATGGATTCTCCTGATGTTACGAAGAAAACCCCCATTTCCATCGCCACTGCCGATGCTGCTGCTTCTTCTGAATCTCCTCCTGTTCAAGAGTCCCCTTTTTTCAGCTTTGTAAACAATTTATCTCCAATAAAGTCTGTCAAGGCTTCTCGTGTTGCTCAAGATTTCCTAGGACTAAATTCTCCCCCTGTCGTCTTCACGTCACCACGTATTAATCCCCATCGTGGATCCAAGTTCTTGGAGAGGCCTCAATGCTCTCAATTAGCCACTGTAGAAATTTCTCGAGGTGTCAATGAAGTCAAGAGCCTTGCTGATAATCCTGTTGACTCTGACAAATCTACCTCTCTGTCGCCGGGATTTATAACTCATAGCAAGAGTTATTCAAATACTCAGCACTGCAGCTCTTCACCGTGTGTAGAATCTGTAGATGAATATTTAACTGATCCTTCAGATATTGATCGTACGTCTTCGGGGCATTCAGTCAACCCCGACGTGAAACAATACAATGAGAATGCTGAATCATCACTAAATGACTTAACTCACGCAAACAAAGCCATATCAAAAGTCGATAACAAATATGGTCCTGATGACAAGAGGAACGAACCTTTGCTTTTGTTAGAGGAGTCTGAAGCCAGCTATCAAGAAAAGGTAAGACTGGTTGATGAAGCAGGGGAGAAAGCTGTTGACTTGCCTTCTGAAGAATGTGCTAAATTAGAGTCTCTTTTGTCTGCTGACCATGTTTTTGAGAAGGAACGTTCTGCCGATTCAGTTGTCCAGTGCACTGGAAATGAAATGCAGGATCATCGTGATTGTACCTCCCAGTCGATGCTTGAGCCTTTTCTGGATGTAAAAGAATGTGAAGATGGTGGCGAGATGGATACAACCTCTTGTATAAGTGTACAGAACATTTCACAGGACAGCACCAAGGCCAGCCAAAAGCACCGAGGCCTGCGTAGACGTTGCCTTCAGTTTGAGGAGGCTGTGTCAAGTAAATTTGGAAATTTGAATAGCTTCCCGCTTCAAGCCCATGTTCCCGAAGACTTGATACCATCAGCTAACTCCTTAGAGTCAAAAGATTTAGAAGCTTCTCATGTTGCACTAAACGACACTACAAGTGAAGAGAGAATGGTCAAGCAGTCCAAACCTATCACTACCACATTTTCTCCACGGTGTAGTGGAAGTTTCCCTGTGAAATGTTCCAAGCCATCAGGTATCGGGTTGCACTTAAATAGCATTATAAATGCTATGCCCCATGGCCGTGCGGCATTTACAGGCATGAGACTAGCAGAGGGTTGTACAGGTTCACAAGGCGGGAAGTCAGTTACTTTACTAAGCTGCCGGAATGCTGAGGACTTGATTCCATCAAAGATTGACGAGCAACCATTAGTTGGCAATAAATGTGAGAGGCACGAAAGGAATGCTTCAATATCTACGGATTCTCGCCCCTCTGAGTCTCCGAGCTCCCTAGAACCTGCAAATTTGTCAATTCTTGTTGAGCATCCAGCAAGTTTTCAAGATGAGAGAAAATTAAGCTCTGTAGGTGATGGAAAATTTGAGGATTCCAATCAAACAAGCCCCAAAAAGAAAAAGAAGAAAACATCGAACTCCACTGATGATGACGGTTGTAAAAGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTACTGTGATTGTTTTGCAGCCGGATTATTTTGTGCTGAGTCTTGTGCTTGTCAAGACTGCTTCAATAGACCAGAACATGGAAATTTGGTTCTTGAGACAAGGCAGCAAATAGAAACCCGTAACCCACTTGCTTTTGCCCCCAAGATTGTGCAGCATGTTACTGACTTTCCTTCAAATAGTATGGACGATACCAATATAACGACACCATCATCGGCAAGACATAAAAGAGGTTGCAACTGCAAAAAGTCAATGTGTCTGAAAAAATATTGTGAATGTTATCAGGCTAATGTTGGATGCTCCAGTGGATGTCGATGTGAGGGATGTAAGAATGTCTATGGCAGGAAAGAAGAATTCGTTACCATTGAACATGCTTTGAGTGAAGAAAGGATAAACAGAACAGAAGAAGGATCAAATAGCACTCTTCACACAGAGCTGGAAACTGAGGCAAAGAAGACCGATATGTTACATGGAGAGTTGTGTGATCTGCACTGCCTTTCTCCTCTAACACCGTCTTTGCAATACTCAGACCAAGGAAAGCAAGCTGCAAACTTACGCGCTCCTTCTGGGAAATATCTTCCGGCCGAGATAAGAAATGCCTCTTGTGATTGGCCACAAGATGGCAACAACATAGAAATAACGGATCAATCATCGCCAAGATGTAATTCCGTTGCCAAAGTAGGCCAGCATACAATTTCTCATTCTCAGTCAATGTCTAGTGCTTCATTGTCAACTAAAACAAGGGATCAGACACATATTCCCCGTGTTCTATCCGGCGGTTCCCTTCGTTGGCGTACTTCACCAATCACCCCAATGACTAAATTAGGTGAAACTAAATCTCTACAGTGTCTTGAATCAAATAGCAGACTTTATGACATTCTAGAAGACGAAACTCCTGAGATGTTGAAGGAAGCTTCGACTCCCGTTAAGTCTGTGAAAACAAGTTCCCCTAAGCAGAAGCGAGTATCTCCTCCTCACGGTCATCTACGTGAACTTGGTTCAGGCTCTTCAGGAGGCTTGAGAAGTGGCCGGAAATTTATATTGAAAGCTGTACCTTCGTTCCCACCACTGACCCCATGTATTACTTCGAAAGCCAATAATGGTCATGAGAATTCAGAGAATAGCAAGCAAGTGACCGACGATCCCAAAAGCTGA 2814 0.4325 MDSPDVTKKTPISIATADAAASSESPPVQESPFFSFVNNLSPIKSVKASRVAQDFLGLNSPPVVFTSPRINPHRGSKFLERPQCSQLATVEISRGVNEVKSLADNPVDSDKSTSLSPGFITHSKSYSNTQHCSSSPCVESVDEYLTDPSDIDRTSSGHSVNPDVKQYNENAESSLNDLTHANKAISKVDNKYGPDDKRNEPLLLLEESEASYQEKVRLVDEAGEKAVDLPSEECAKLESLLSADHVFEKERSADSVVQCTGNEMQDHRDCTSQSMLEPFLDVKECEDGGEMDTTSCISVQNISQDSTKASQKHRGLRRRCLQFEEAVSSKFGNLNSFPLQAHVPEDLIPSANSLESKDLEASHVALNDTTSEERMVKQSKPITTTFSPRCSGSFPVKCSKPSGIGLHLNSIINAMPHGRAAFTGMRLAEGCTGSQGGKSVTLLSCRNAEDLIPSKIDEQPLVGNKCERHERNASISTDSRPSESPSSLEPANLSILVEHPASFQDERKLSSVGDGKFEDSNQTSPKKKKKKTSNSTDDDGCKRCNCKKSKCLKLYCDCFAAGLFCAESCACQDCFNRPEHGNLVLETRQQIETRNPLAFAPKIVQHVTDFPSNSMDDTNITTPSSARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNVYGRKEEFVTIEHALSEERINRTEEGSNSTLHTELETEAKKTDMLHGELCDLHCLSPLTPSLQYSDQGKQAANLRAPSGKYLPAEIRNASCDWPQDGNNIEITDQSSPRCNSVAKVGQHTISHSQSMSSASLSTKTRDQTHIPRVLSGGSLRWRTSPITPMTKLGETKSLQCLESNSRLYDILEDETPEMLKEASTPVKSVKTSSPKQKRVSPPHGHLRELGSGSSGGLRSGRKFILKAVPSFPPLTPCITSKANNGHENSENSKQVTDDPKS 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2246 937 MobiDBLite consensus disorder prediction 854 937 - -
Alju07g2246 937 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 19 917 IPR044522 GO:0003700
Alju07g2246 937 MobiDBLite consensus disorder prediction 912 926 - -
Alju07g2246 937 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 630 664 IPR005172 -
Alju07g2246 937 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 542 577 IPR005172 -
Alju07g2246 937 SMART CXC_2 627 668 IPR033467 -
Alju07g2246 937 SMART CXC_2 539 580 IPR033467 -
Alju07g2246 937 ProSiteProfiles CRC domain profile. 540 667 IPR005172 -
Alju07g2246 937 MobiDBLite consensus disorder prediction 506 540 - -
Alju07g2246 937 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2246 Alju-ChrAlju07 48410721 48415514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2246 519 670 CPP Transcription Factor Family AT3G22760 62.745 3.07e-60 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Alju07g2246 TCR 3.9e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2246 07 48410721 48415514 Alju07g2246 07 48410721 48415514 ECH