Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2242 ATGCAGGGTACGGGTCAGGCCGCCACAAGCTCTCTGCCTTCCAGCAGTGAAAAATCCTCCAGTTCTGCTCTCCACCTCGATGTTAAAGGACCGGAGAGCGATGAGGAGATCAGAAGGGTGCCGGAGTTGGGCGGTGAATCCGCCGGAACGTCAGCTTCCCGGCCGGATACCGGAGTGGTTCAAGGGAGAGGGGAGAATCAGAGGAAGAGAGGCAGAAGCGCTGCCGACAAAGAAACCAAGCACCTCAAGAGGTTGCTAAGGAACAGAGTTTCGGCTCAGCAAGCAAGAGAGAGGAAGAAGGCATACCTGAATGATTTGGAAACAAGGGTGAAAGACTTGGAGGAGGAGAATACGGAACTAGAAGAGAGATTATCCACTTTACAGAACGAGAATCAGATGCTAAGACATATACTGAAGAACACAACTGCAAGCAGAAGAGGAGGCAATGGTGGTGCAAATGAAGGAGCTTTATGA 474 0.5127 MQGTGQAATSSLPSSSEKSSSSALHLDVKGPESDEEIRRVPELGGESAGTSASRPDTGVVQGRGENQRKRGRSAADKETKHLKRLLRNRVSAQQARERKKAYLNDLETRVKDLEEENTELEERLSTLQNENQMLRHILKNTTASRRGGNGGANEGAL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2242 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 141 IPR004827 GO:0003700|GO:0006355
Alju07g2242 157 MobiDBLite consensus disorder prediction 63 83 - -
Alju07g2242 157 FunFam Transcription factor HY5 99 140 - -
Alju07g2242 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Alju07g2242 157 Pfam bZIP transcription factor 77 137 IPR004827 GO:0003700|GO:0006355
Alju07g2242 157 SMART brlzneu 76 140 IPR004827 GO:0003700|GO:0006355
Alju07g2242 157 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 6 152 IPR044280 GO:0000981|GO:0045944
Alju07g2242 157 MobiDBLite consensus disorder prediction 1 83 - -
Alju07g2242 157 Gene3D Single helix bin 99 140 - -
Alju07g2242 157 SUPERFAMILY Leucine zipper domain 80 138 IPR046347 GO:0003700|GO:0006355
Alju07g2242 157 PRINTS cAMP response element binding (CREB) protein signature 75 91 - -
Alju07g2242 157 PRINTS cAMP response element binding (CREB) protein signature 9 24 - -
Alju07g2242 157 PRINTS cAMP response element binding (CREB) protein signature 93 113 - -
Alju07g2242 157 PRINTS cAMP response element binding (CREB) protein signature 113 130 - -
Alju07g2242 157 MobiDBLite consensus disorder prediction 1 23 - -
Alju07g2242 157 MobiDBLite consensus disorder prediction 28 42 - -
Alju07g2242 157 Coils Coil 96 137 - -
Alju07g2242 157 CDD bZIP_HY5-like 82 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2242 Alju-ChrAlju07 48380078 48380992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2242 23 137 bZIP Transcription Factor Family AT5G11260 68.293 1.30e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju07g2242 bZIP_1 4.1e-15 CL0018