Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2238 ATGTTGGTGCTTCTTCTGTGTGCGTCAGCTAGCTTGCTTGTAGAAGCTTGTTCAGGCTCTATGATAGACCTTACAACTTTCTCTTTCGCGTCGTTTGGCCCTGAAAGTTGCAGCAGCGGTGAGCTTCTGTGCATGGGGTCGGCGACATCAGGCGAGGGCCATTTGAGGCTGACTCCTGAGCCGTGGATCAATTCGAGTTCGCCATGGTCGTCGGCGATGAACAAGATTGGAAGGGTGTTGTACCCTCAAAGGGTTAGAGCGTGGCCTGCTTTAATCAGCACTTCCTTCACTATGAGGATCAATCCCATGGATAATAATTCAACCATCTCTGGTGATGGTCTTACTTTTGTTTTTGCAAGTAATCACAACCCCTCACCACCTTCTAGCTACGGCTCTTATTTGGGCTTATTTGATCACTCTACTCAAGGTGAATCTTTGCAACAAATAGCTGTTGAGTTTGACACATTCAAGAACGAGTTTGATCGAGATGGAAACCACGTTGGGGTAGTCACAGGAAGCACTATAAGTCCAGTTGCTACAGAGAGTCTAAATCACGTTGGGATTAAACTAAGCAGTGGACAAACTATTCTGGTTAAAATAGAGTACGATGGTTCCATTAACAAGCTTTATGTCTCTCTCGGATACTCCGAAAGTACGTTAAAGAGCATTCTTAACCTCTCTCTTGATCTCCCAAATATTGTCCCAAACACAGTTTATGTTGGTTTCACAGCTTCTACGGGCAACACTTTGCCTGAAAGCCATGAAATCCTCAATTGGGTGTTCACTTCAGTTCCTTTGCCTTCATTATGTGCTAGTAATAAACCCAGCAAAAACGAGACCATTAAGACCATTCTGATCGTTGTCATACCCATTTTTCTGGCCATATTGGCAAGCTCATTTCCATTTATCTGGGAAACCATGAAGAAAAGGAAAAAGAAGATTGATAAGAGGGGTGATAATAATAGGCAACATGTTATAGATCAATGCTCATCAATAGCTGCTCCAGATATTCCCAAAGAGTTCACTTTCAAGCAATTATCTATGGCTACAAGCACCTTCAGGAAGGAGAATCTTTTAGGAAGAGGTGGATTTGGCAGTGTTTATAAAGGCCTCCTTTTTAATCCCGCAAAAACCATAGCAGTCAAGAAGATTTCAGCAAATTCTAAACAAGGCGAAAGAGAGTATTTCGCTGAAATATGCACCATAGGCCGACTTAGGCACAAGAACATAGTACAGCTACTAGGGTGGTGCCATGAAGACGAATATCTTCTCTTGGTATATGAGTACATGCAAAATGGAAGTTTAGATCGGTTCATAGGCAAGGACATTCTGAACTGGCAAACAAGGGTCAAGATATTTGTAGGACTTGCGTCAGCATTAGTCTACCTTCATGAAGACTGTGGAAACCCAGTTGTTCACAGAGATGTTAAACCAAACAACGTAATGCTAGACTCAGATTACAACGCTCATCTTGGAGATTTTGGCCTCGCAAGGTTGCTGTATAATGAAGAATCAGTGATCACAAACCTAGCAGGAACTCCTGGATATTTGGCTCCAGAAATAGGTTTCACAGGAAAAGCCACACCAGAATCAGATGTTTACAGTTTTGGGATGGTAGTGCTTGAAGTTATATGTGGAAGAAGATCAACAAAGGGCAATACAGAAGATAACTACAGTTTGGTGGACTATGTTTGGAACATGCATAGTGAGAATGCTTTGATGGAGTGTGTGGACGCGCTTTTAGGAGATGAGTTTGATGAGGAAGAAGTTAGAAGGGCACTGATGGTTGGATTGGCTTGTTTGTCTCCAGATCCTGTGTTTAGGCCAAAAATGAGAAAAGTGGTGCATATTTTGCTAGATCCAAACGAGCCTTTAATGGAGTTACCAATGGTGAGGCCTCTTGGAGTTTATGTGTCAGTTTCTTCGTCTACTTCAAGAACCTCTAACTTTGGCTCCACCAGAGGTGATTCGCATCAGCTTCTTCACTCGGGAACAACATCATTAGAGGAGATTTCAATTGTGTACGATCAACAGTGA 2037 0.4261 MLVLLLCASASLLVEACSGSMIDLTTFSFASFGPESCSSGELLCMGSATSGEGHLRLTPEPWINSSSPWSSAMNKIGRVLYPQRVRAWPALISTSFTMRINPMDNNSTISGDGLTFVFASNHNPSPPSSYGSYLGLFDHSTQGESLQQIAVEFDTFKNEFDRDGNHVGVVTGSTISPVATESLNHVGIKLSSGQTILVKIEYDGSINKLYVSLGYSESTLKSILNLSLDLPNIVPNTVYVGFTASTGNTLPESHEILNWVFTSVPLPSLCASNKPSKNETIKTILIVVIPIFLAILASSFPFIWETMKKRKKKIDKRGDNNRQHVIDQCSSIAAPDIPKEFTFKQLSMATSTFRKENLLGRGGFGSVYKGLLFNPAKTIAVKKISANSKQGEREYFAEICTIGRLRHKNIVQLLGWCHEDEYLLLVYEYMQNGSLDRFIGKDILNWQTRVKIFVGLASALVYLHEDCGNPVVHRDVKPNNVMLDSDYNAHLGDFGLARLLYNEESVITNLAGTPGYLAPEIGFTGKATPESDVYSFGMVVLEVICGRRSTKGNTEDNYSLVDYVWNMHSENALMECVDALLGDEFDEEEVRRALMVGLACLSPDPVFRPKMRKVVHILLDPNEPLMELPMVRPLGVYVSVSSSTSRTSNFGSTRGDSHQLLHSGTTSLEEISIVYDQQ 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2238 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 264 IPR013320 -
Alju07g2238 678 PANTHER - 59 620 - -
Alju07g2238 678 FunFam Lectin-domain containing receptor kinase A4.3 430 639 - -
Alju07g2238 678 ProSiteProfiles Protein kinase domain profile. 353 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2238 678 Gene3D - 22 278 - -
Alju07g2238 678 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Alju07g2238 678 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Alju07g2238 678 CDD STKc_IRAK 359 618 - -
Alju07g2238 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Alju07g2238 678 Gene3D Transferase(Phosphotransferase) domain 1 430 624 - -
Alju07g2238 678 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Alju07g2238 678 SUPERFAMILY Protein kinase-like (PK-like) 338 642 IPR011009 -
Alju07g2238 678 SMART serkin_6 353 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2238 678 ProSitePatterns Protein kinases ATP-binding region signature. 359 383 IPR017441 GO:0005524
Alju07g2238 678 FunFam serine/threonine-protein kinase PBS1-like 320 429 - -
Alju07g2238 678 Pfam Protein kinase domain 354 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2238 678 Pfam Legume lectin domain 26 264 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2238 Alju-ChrAlju07 48337957 48341622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2238 51 633 Receptor kinase-like Gene Family AT5G55830 37.143 2.93e-111 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju07g2238 Pkinase 5.2e-48 CL0016