Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2211 ATGGGAGTGGATAAGCCATCAAAATGGCAGTTCACATGGTTTTTGCTGCAGGAAAGTGAAGCCAAAGAGATACCAATTCCTAACATTAAATGGAATGTCTTTGAATTGATGATGAGATTTATTTACACAGGAAATGTAGATGTGAATTCTGATATTGTTCAGGATCTCCTAAGAGCTGCTGATCAGTATCTTCTGGATCGTCTTAAGGGGCTCTGTGAAAGTGCAATTGCTCAAGATGTTTCTGTGAAAAATGTTTCACTTATGTACGAGTTATCAAAGTCATTCAATTCTATGTCATTAAGGCAAGCTTGTCTCCTATTTTTGTTGGAGCAATTTGACAGACTGAGTGACAGACCATGAGCCATCATAGTGGAGGCATATGAAGGTGTGTGCTTAAGTTACTCCCAGTTGTATAAGTAG 420 0.3857 MGVDKPSKWQFTWFLLQESEAKEIPIPNIKWNVFELMMRFIYTGNVDVNSDIVQDLLRAADQYLLDRLKGLCESAIAQDVSVKNVSLMYELSKSFNSMSLRQACLLFLLEQFDRLSDRPXAIIVEAYEGVCLSYSQLYK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2211 139 SUPERFAMILY POZ domain 17 78 IPR011333 -
Alju07g2211 139 Gene3D Potassium Channel Kv1.1; Chain A 8 118 IPR011333 -
Alju07g2211 139 Pfam BTB/POZ domain 17 78 IPR000210 GO:0005515
Alju07g2211 139 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 17 120 IPR044282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2211 Alju-ChrAlju07 48151738 48153132 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju07g2211 BTB 4.7e-13 CL0033