Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2192 ATGGAATCGCCTTACATTCTGTGTCCTTATAAATACCCACTTCCTCCAATCCTCTCGATACTGTTTCGCGCAATAGTGCAATACCCTTCTCCTAAGCTGATTATGAGTAGTCGCTACGATGAGGCTGAAGATTATGTGCTGGGATTCATTGCGTCTAAGAAACAGATACGCTGCCAAACTAATCTTCGACATCAAGAAGCTCAGGCTCCTGGAAGCCCTGCACACTGGAGCAAGAGCTGCAAGACGCTATGCCAGAGACATTGTGACCCAAGAGTTTCCTCGGTTCAAAGCAATGGAGCTGGTTTGCGAGCAGGACAACAGTCATTGCTTCACCGTCTGCTGGCGGCAACGGATCATGAAAACAGCGTCGCCATGCAAACAACTACAGCACAACTCTCTCCGCATCTCTCTGGCACGAGCTTATGTGAAAGTGGGCAATACTTTGACAAGAAACATTTTGAGACATGGAGCTTGCTGGAAAATCTGAGGACGATAAGACCAATCAATCTTGTTCCACACATGGAACATGAATCACTTTCAAACTGCCAAGACACGAATTCTGTGAGGGAGGTTGTCGCAGAGGATCCTAAAACAATCGTTGAAGAAAATCCACCGCCCAATAAAAGGCTTAAGTTTCCTGCTGCAGAATCTCACTTAAATTGGCAGCATATTCCTTCCAAACACCATATTCCTGAGCCTGTTATGCCAACCCCCTCTGTGGACCATGTCTGTGAGCTATGCTCAAATCCTTCAAATCCTGTAAACAGTGATGATGGTAGCCCATCTAGTGTAATAGATTCCTCACTCTTCCCTACTGCTAATGCAATTTCAGGAATGCCTGTGAAGGTTTCTGAGGATCCTAATCAACTAAATGAGGTGCCATCACCAGCCCCAAAAAATTGCCTGCCCCAGAAAGTTGTTCTGACACTGAATGCTGATTCACCTCCTACTAGCATGGATTTTCATCCTATTTGGCACTTTATTCTTCTAGCTCCTGCCTCTTGGAGGGAGTTGCTTTCTGTAAATTTTGAGGTTTGGGGAGCACGTTCAACCAATTTTAAGGCAGCCATAGGAAAAGATATGTGGATCTCTGTCAACAAAGTCATTTGGAGCTCTCATGGTTTAATGTTCGGGGTTGCATTTGCGAAACATCTTATTGAAGCTCATGATGGCAGTGTCAATGATATAGCCTTGTATTTGGTTCGTGGGCAACCATTAGTCATAACATGTGGTGACGACAAGGCAGTAAAGGTATGGGATGCAAACACCGGTGAGAAGCTTAAAACTTTGCTTGCTCACAATGCTCCAGTTTGTTCAATCTGTACTCATGTGAAGGAAAATGTTCTTATTATAATTTCAACTTCAATTGATGGAAAGATTAAGGCACGGTTATACAATCATAACAGCAACGGTGCTGATTATGACACCATTGGTTGTGGATACACTAAATTTGCTTACAGTACTGATGATCAAAGGCTTTTTTCATGTGGTTTTATCAAGGAGGGAGAGCCATTTCTTGTGGAATGGGATGATAGTAACGGGAGCAAAAAAAGAGTCTACAAGGGACTTAAGGCTCCAAGCTCTTCTAAAATCCAATTTGATACCACACAGAACCGATTTTTGGCTGCTGGTGATGATCACATGGTTAAGTATTGGGATATGGACAATGTACAGCTATTGGAAAGCACCAATGCCGATGGGGAATTGCTGGCAAATCCTTGCCTTTGCTTCAACAAAGATGGTACATTGCTGGCTGTTGCTGCAAGAGAAAATAAAATAAAAATCTTAGCACCTGATTATGATGATATTTCGAATATCTTCAAAGTTTCCGAACCATCTCAATGCCAGTTCTTGCAACTCCCTGTTCATCAAAGTGTCAACAAGTTTATGATCAATGACCGAGAAAACTTCAGGCCCGTAGAATCAGTAGGCTGTTTTGCCATATCAAATAATGGTGTTAATCTCGTTTCAACATCAGGTGGTTCATTCTCCTTGTTCAACATGGAGACATTCGAGACTATCAAAACCTTCATGTCTCCACCACCTGAGGCAACGTCTATTTCCTTCTACCCTCGAGATGATAATGTAGTAGCTGTAGGCTTTGTTGATTCTAGCATCCTTATTTATAACATCCATACAGATACGCTTTTAAAAAAGCTCACGGGTAACTCAACAATAGTTACTTCCGTTGCCTTCTCAAGTACTTTGCATGCTCTTGTTCATGCTGAGGCTGATAATACGATTTTCTCATGGAATGTTGAAAAATGGGAAAATTTGAAAGGAAGGCGCTTGCAGTTGCCTGCTGAGAGGGACCCAGAAGTGCTATGTAATGCTCACATTCAGTTTCACCCAGAACAGATAAACTTCCTCGTTGTACAACATAGTCATCTTGCAATTTATGAAGCACAGGACTTCACTTTTGTCAAACAGTGGGTTCAAGTACCTCCTTTACCTATCTTACAGGCAGATTTTTCATCTGATGGAACGGAAATATATGCTGGTTTTGGGGATGGGACTATCAAAATATTGGATGCTTCAAATCTTCAACCTCTTTGCAGGGTAGATCCCACTGCTTACCTTCCCCTTCTCCCCACTTCAAGCAGCAGTGAAGGCCTACGTGCTATAGCTGCAAATCCAGTGAAGGCAGGCCAGTTTGCTGTGGGGTTTTCAGATGGTAAAGTCTATGTGATGGAGCCTCCAGAGGCAGGACTTAAGTGGTCCACACTCGTACGCGATGATGACAAGGAGGCAGCAGAAACCAGTGGCGTGGGAGATGCGAATTGA 2784 0.4325 MESPYILCPYKYPLPPILSILFRAIVQYPSPKLIMSSRYDEAEDYVLGFIASKKQIRCQTNLRHQEAQAPGSPAHWSKSCKTLCQRHCDPRVSSVQSNGAGLRAGQQSLLHRLLAATDHENSVAMQTTTAQLSPHLSGTSLCESGQYFDKKHFETWSLLENLRTIRPINLVPHMEHESLSNCQDTNSVREVVAEDPKTIVEENPPPNKRLKFPAAESHLNWQHIPSKHHIPEPVMPTPSVDHVCELCSNPSNPVNSDDGSPSSVIDSSLFPTANAISGMPVKVSEDPNQLNEVPSPAPKNCLPQKVVLTLNADSPPTSMDFHPIWHFILLAPASWRELLSVNFEVWGARSTNFKAAIGKDMWISVNKVIWSSHGLMFGVAFAKHLIEAHDGSVNDIALYLVRGQPLVITCGDDKAVKVWDANTGEKLKTLLAHNAPVCSICTHVKENVLIIISTSIDGKIKARLYNHNSNGADYDTIGCGYTKFAYSTDDQRLFSCGFIKEGEPFLVEWDDSNGSKKRVYKGLKAPSSSKIQFDTTQNRFLAAGDDHMVKYWDMDNVQLLESTNADGELLANPCLCFNKDGTLLAVAARENKIKILAPDYDDISNIFKVSEPSQCQFLQLPVHQSVNKFMINDRENFRPVESVGCFAISNNGVNLVSTSGGSFSLFNMETFETIKTFMSPPPEATSISFYPRDDNVVAVGFVDSSILIYNIHTDTLLKKLTGNSTIVTSVAFSSTLHALVHAEADNTIFSWNVEKWENLKGRRLQLPAERDPEVLCNAHIQFHPEQINFLVVQHSHLAIYEAQDFTFVKQWVQVPPLPILQADFSSDGTEIYAGFGDGTIKILDASNLQPLCRVDPTAYLPLLPTSSSSEGLRAIAANPVKAGQFAVGFSDGKVYVMEPPEAGLKWSTLVRDDDKEAAETSGVGDAN 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2192 927 Gene3D - 485 605 IPR015943 GO:0005515
Alju07g2192 927 Pfam WD domain, G-beta repeat 386 420 IPR001680 GO:0005515
Alju07g2192 927 SUPERFAMILY WD40 repeat-like 781 899 IPR036322 GO:0005515
Alju07g2192 927 Gene3D - 793 912 IPR015943 GO:0005515
Alju07g2192 927 ProSiteProfiles Trp-Asp (WD) repeats profile. 531 562 IPR001680 GO:0005515
Alju07g2192 927 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 298 599 IPR027728 GO:0006355
Alju07g2192 927 ProSiteProfiles Trp-Asp (WD) repeats profile. 386 429 IPR001680 GO:0005515
Alju07g2192 927 Gene3D - 378 472 IPR015943 GO:0005515
Alju07g2192 927 Gene3D - 606 791 IPR015943 GO:0005515
Alju07g2192 927 ProSitePatterns Trp-Asp (WD) repeats signature. 407 421 IPR019775 -
Alju07g2192 927 SMART WD40_4 562 597 IPR001680 GO:0005515
Alju07g2192 927 SMART WD40_4 670 710 IPR001680 GO:0005515
Alju07g2192 927 SMART WD40_4 513 553 IPR001680 GO:0005515
Alju07g2192 927 SMART WD40_4 713 752 IPR001680 GO:0005515
Alju07g2192 927 SMART WD40_4 804 844 IPR001680 GO:0005515
Alju07g2192 927 SMART WD40_4 423 466 IPR001680 GO:0005515
Alju07g2192 927 SMART WD40_4 379 420 IPR001680 GO:0005515
Alju07g2192 927 ProSiteProfiles Trp-Asp (WD) repeats profile. 720 761 IPR001680 GO:0005515
Alju07g2192 927 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 390 758 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2192 Alju-ChrAlju07 47977823 47987453 Proximal