Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2173 ATGATAGAAGTAGTATGCAGAAAAGGTCAGAAAGTGATGAAGGGGGACCCACCCATTTCATATACGCGTGAAGTGGGGCCCAAGAAGAACCCAACATGGGTGACGATGGAGAGCAAAAAGCTAAGAGTCACCGCCTTGAAGAGATCGAAGCTTGTTCAGCCAAGTTGTGCTCACTCTGAAGCTTCAAGGGGATCTAAACTAAACAATAAAGGGAGGCACATGAAGGAATTGATATATTGGGAAGCACATGCTTTGTTTCTGCAAACTTCCAAGATTTTGAGGGTTTTGGTGTTCGGTGGTATCTCCCTTGACCTCTCGGCGCCGAGGATCTCTAAAGACGACGCGAAGATGCCGTCCCACAAGACCTTCAGAATCAAGAAGAAACTGGCCAAGAAGATGAGACAAAACAGGCCTATTCCCTACTGGATCCGCATGAGGACCGACAATACCATCCGGTACAACGCCAAGCGTCGACACTGGCGCCGCACCAAGCTTGGATTCTGA 504 0.4861 MIEVVCRKGQKVMKGDPPISYTREVGPKKNPTWVTMESKKLRVTALKRSKLVQPSCAHSEASRGSKLNNKGRHMKELIYWEAHALFLQTSKILRVLVFGGISLDLSAPRISKDDAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2173 167 PANTHER RIBOSOMAL PROTEIN L39E 109 167 - -
Alju07g2173 167 ProSitePatterns Ribosomal protein L39e signature. 146 162 IPR020083 GO:0003735|GO:0005840|GO:0006412
Alju07g2173 167 Gene3D Ribosomal protein L39e 117 167 IPR023626 -
Alju07g2173 167 FunFam 60S ribosomal protein-like L39 117 167 - -
Alju07g2173 167 Hamap 50S ribosomal protein L39e [rpl39e]. 117 167 IPR000077 GO:0003735|GO:0005840|GO:0006412
Alju07g2173 167 SUPERFAMILY Ribosomal protein L39e 119 166 IPR023626 -
Alju07g2173 167 Pfam Ribosomal L39 protein 125 165 IPR000077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2173 Alju-ChrAlju07 47849221 47854595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2173 117 167 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 1.18e-28 99.0