Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2168 ATGGGACACTGTGTCCAGGGATATGGAGTTTCAAGTACAGAGGAAAAGTTGTTTGGTGAATTGAACATGACAATGTTGGCCTTAACTTCCAATTTCAATGCCCATAGAATCCACAAGTATCTCCGTCATCCTCACAAACAAGAGGGCCGAGAAAAGCACTCCAAGATGGAAGACAAAAACTACCAAGAAGACAAGATCAAGACAGAAACTTTATTGGATCTTAATGCTTCTGATCTTGATGAGAACAACCCCGAACTCAATCTCATCACTTGCTTGGATCACAGTTCATCAAAAACATCATCAGAAAGCTGTGCCAATGGTGGTGGTGGTTCTGTTTCAGAAGCAGAGCCGAGATTTTTCTCATGTAATTACTGCCAGAGAAAGTTCTACAGCTCACAAGCTCTTGGGGGACACCAAAATGCACACAAGAGAGAGAGATCAATAGCGAAAAGAGGGCAGAGACTTGGAACACAAATACTGGCTTCAGCTTATGGGCATCCTTTTCTGCAAAATTATGGGTATGCGAGCATGGCTTCTCTGCCTCTCTACGGTGCTTCCTGCAATAATAGGCCTCTAGGGATTCAGGCTCATTCTTTGATTCACAAGCCCTTTAATAATAATGTTCATAATAGGGGTTGGTCACAGCAGCCTGGGATAGGGAAGCTAGAGATGGGGAATTTTCATAGAACGACGTCGTCCGGATTGGCTTCGAGAGGCAGTGTGGGGAGGTTCGAAATCGTGAAGGCCAAGATGGGTTCTGCAGAAAAGGAAGAGATGAGTGGGTATTTGGTGAGTGGGACTCATTGTTTGAAAGCTAATCCTGAAGAAATGAAACATCTTGATTTATCTCTGAAGCTTTGA 861 0.4379 MGHCVQGYGVSSTEEKLFGELNMTMLALTSNFNAHRIHKYLRHPHKQEGREKHSKMEDKNYQEDKIKTETLLDLNASDLDENNPELNLITCLDHSSSKTSSESCANGGGGSVSEAEPRFFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQRLGTQILASAYGHPFLQNYGYASMASLPLYGASCNNRPLGIQAHSLIHKPFNNNVHNRGWSQQPGIGKLEMGNFHRTTSSGLASRGSVGRFEIVKAKMGSAEKEEMSGYLVSGTHCLKANPEEMKHLDLSLKL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2168 286 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Alju07g2168 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
Alju07g2168 286 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 45 286 IPR044246 GO:0009788
Alju07g2168 286 SUPERFAMILY beta-beta-alpha zinc fingers 117 147 IPR036236 -
Alju07g2168 286 Gene3D Classic Zinc Finger 95 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2168 Alju-ChrAlju07 47819360 47820662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2168 78 286 C2H2 Transcription Factor Family AT5G25160 40.773 4.67e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju07g2168 None None None