Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2164 ATGACTGTAGAAACCAGAGCTGATGAACCCAGAGGACAATTTCCTGTAGGAATGCGTGTTCTTGCTGTTGACGATGACCCAACTTGTCTTTTGGTGTTGGAAACTCTCCTTCGGAGATGCCAATATCACGTAACGACGACCAATCAGGCAATAACAGCTTTGAAGATGCTAAGAGAAAACAAAAACAAGTTCGACCTGGTTATTAGTGATGTTCATATGCCTGACATGGACGGATTTAAGCTTCTTGAGCTTGTCGGTCTTGAGATGGACCTACCTGTCATAATGTTGTCTGCAAATGGCGACACCAAGCTGGTGATGAAGGGGATTTCTCATGGGGCTTGTGACTATCTTCTGAAACCTGTTCGAATCGAGGAGCTCAAGAACATTTGGCAGCATGTGATAAGGAGGAAGAAATTTGACCCAAAGGAGAAGAACAGTACTTGCAATAAAGACAAGCCTCAATCTGGTAGTACCAACAATGGATTAGGTTCAGCAGGAGCTGGGAGTACTGATCAGAATGCAAAGCTCAACAAGAAAAGGAAGGATCAGGATGATGAAGATGATGATGAGCATGAGCATGAGCATGAGCATGGTCATGACAACGATGATCCTTCAGCACAGAAGAAGCCTCGTGTCGTTTGGTCTGTTGAGCTCCACAGAAAGTTTGTGGCTGCTGTTAATCAATTAGGCATTGACAAGGCTGTGCCTAAGAAGATTCTGGATTTGATGAATGTTGAGAAGCTCACAAGGGAGAACGTGGCAAGCCATCTCCAGAAATATAGGTTATATCTGAAGAGAATCAGCTGTGTAGCAAACCAGCAGGCTAATATGGTGGCAGCCTTAGGTAGTGCAGATGCATCCTATTTGAGAGTGGGATCTCTGGGTGGAATGAAACATCTTCAGCCAATGGGTGCTTCTGGACAGTTCCAGAACAATGTTTATCGATCCCTCCCATATAGTGGGATGATTGGAAGACTGAACACTCCTGCTGGTCTCGGTGTTCACGGGTTGCCTTCTTCAGGAATTCTTCAGTTGGGTCATGCACAGAATTTAAACAACAACAGCAGCAGCAACTCCATGAACGATCCTCTCAAGTTCCAGTCATCCATAGCTCACGTCAATCACAATCAGAATGGCGGTTCCCTTCAGGGCATGCCAGTGTCTGTAGGGCTTGACCAATTACAACCCAACAAGGTTGTCAGTTCTGTTCAAGGTCCCACCACTGGTTTTGATGATAAAACAATGTCTCTCATCTCGAACAAGTTGTCTGATCCGAGAGCAGGAGTAGTCTCTGGTTGCTCTAGACCTCCACTCGTGGGTATAGCGTCCAATGGCTTCTTGTTGGAACCGAATTCTCAAGACTCGCAAGGTGGGAGAGGTTATGAGAATCTTACTTCAGTAGCCTCTCAACACCCAGAATTTTCTTTGCCTTTGATGGATAATCATAATGGAAGGTGTAATGATAATTGGTCAAGTGCTGTGCAGTCATCTGGGATGCCCACTAATTCTTACCCAACAAGTAATTGTCTTCATGGAGGGAATCCAAGTGGTGCTTCTTCCATCACCTCACTTTCCACTCGGTCCCACGATTCGCTTGCAGATATGCAATCCCATGGACCCATGTTTACTAATAACAACACCACACAAAACTTGGCTTATCAAGGGTGGGATGATCATTCATTGGACTCTCTGATTCCTGTAAATGGAGGTCTTGGTGCATCAGGATTACACAGAAACTTGGACTATAGTTTTGGCAATCCCTTGGAAATGAAGCATGAGGGGTTCAATAAATCAGCCCAAGACCCCCCCCTGAAACCAAATCAAGGATATATCATGGACCCCCATAAGGCACAACGGAGTCGCATCTCTAATAATAATCTTGGTTCATTGGAGGACTTGGTCAGTGCAATGATGAAACAGGAGCAAGACTTCATATGTGATGATTTCACTGGTGGAACATCTCTGTGA 1968 0.4502 MTVETRADEPRGQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAITALKMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKEKNSTCNKDKPQSGSTNNGLGSAGAGSTDQNAKLNKKRKDQDDEDDDEHEHEHEHGHDNDDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADASYLRVGSLGGMKHLQPMGASGQFQNNVYRSLPYSGMIGRLNTPAGLGVHGLPSSGILQLGHAQNLNNNSSSNSMNDPLKFQSSIAHVNHNQNGGSLQGMPVSVGLDQLQPNKVVSSVQGPTTGFDDKTMSLISNKLSDPRAGVVSGCSRPPLVGIASNGFLLEPNSQDSQGGRGYENLTSVASQHPEFSLPLMDNHNGRCNDNWSSAVQSSGMPTNSYPTSNCLHGGNPSGASSITSLSTRSHDSLADMQSHGPMFTNNNTTQNLAYQGWDDHSLDSLIPVNGGLGASGLHRNLDYSFGNPLEMKHEGFNKSAQDPPLKPNQGYIMDPHKAQRSRISNNNLGSLEDLVSAMMKQEQDFICDDFTGGTSL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2164 655 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 368 IPR045279 GO:0009736
Alju07g2164 655 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 265 IPR017930 -
Alju07g2164 655 CDD REC_typeB_ARR-like 20 134 - -
Alju07g2164 655 SMART REC_2 18 130 IPR001789 GO:0000160
Alju07g2164 655 PIRSF RR_ARR_type-B 1 654 IPR017053 GO:0003677|GO:0003700|GO:0009736
Alju07g2164 655 Gene3D - 17 154 - -
Alju07g2164 655 FunFam Two-component response regulator 18 173 - -
Alju07g2164 655 NCBIfam myb-like DNA-binding domain, SHAQKYF class 209 262 IPR006447 GO:0003677
Alju07g2164 655 SUPERFAMILY Homeodomain-like 207 266 IPR009057 -
Alju07g2164 655 MobiDBLite consensus disorder prediction 140 208 - -
Alju07g2164 655 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Alju07g2164 655 FunFam Two-component response regulator 205 268 - -
Alju07g2164 655 MobiDBLite consensus disorder prediction 174 207 - -
Alju07g2164 655 Pfam Myb-like DNA-binding domain 211 261 IPR001005 -
Alju07g2164 655 Gene3D - 205 268 - -
Alju07g2164 655 SUPERFAMILY CheY-like 17 139 IPR011006 -
Alju07g2164 655 MobiDBLite consensus disorder prediction 150 173 - -
Alju07g2164 655 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2164 Alju-ChrAlju07 47764556 47767588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2164 1 510 Response Regulator Gene Family AT2G25180 51.252 4.93e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Alju07g2164 Response_reg 5e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2164 07 47764556 47767588 Alju08g0843 08 6348893 6352621 CCT