Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2160 ATGGCAAAGTATCACCGGAACAACGTCGGATCTCTGGTTCTCGACAATCACGATGCTACCAGGAATGCAACAGTCGGCGCCCACTATCGCATATGGAATGCCTTCTCCGCTTCAACAATACGCCGCATCATTTTTGACGCTGTCAGCTGCGGTTGTGGCTCTCGGCATCACCGCCACCACCGTAATGACTTTGCCTCCGCACCATCGCCGATTTCATCAGACTCCGGGAACTCTAAGGACAAGTCGCGAGAACAGAGACAGAGTGCTTCCAAGTCTAAGCCGAAACCAAATGTGAAGTCGGAGAAACTATCTGATCTTCTGAATATAGCGGAGTCTGAAATCGACGCCGAAACGAAGAAGAAAGAAGAGGCATTGCAGGAGTTGAAGAGAACTGTGAAGGAGTTACAGGTTGAGGATTTGACAAAGCGGGATATGGCTGCGGCGAGCATGAGATTGCTCGCGAAGGAAGACTCGGAAGTCAGGGGGACACTTGCAATGCTTGGAGCGATTCCTCCCTTGGTTGGAATGCTTGATTTGGAAGACGTCAGTTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTTGGAATCGGCAACGACGCAAATAAAGCAGCCATTGTCCAAGTTGGTGCTGTTCACAAAATGCTAAAGCTCATTGAATCACCAACTGGTCCAGATTCATCCGTCTCTGAAGCAGTTGTTGCAAATTTCCTTGGCTTGAGTGCTTTGGATGATAATAAACCAATAATTGGATCGTCGGGTGCGATTCCTTTCCTGTTCAGAACCCTGGAAAATTCACATAAAAAAACCAGCCCCCAGGCTAAGCAAGATGCTCTCCGAGCACTTTACAACCTATCTATCTTCCCAGCCAACATCTCATTCATATTGGAAACGAATTTGGTTCTGTTTCTGATAAACTCAATAGGAGACATGGAAGTGAGTGAAAGAATTCTCTCAATCATAAGCAATTTGGTATCAATCCCTGAGGGTCGAAAAGCTGTAAGTGCTGTGCGCGATGCATTCCCCATTCTGGTTGATGTATTGAATTGGACAGATTCACCTGGATGCCAGGAAAAAGCATCTTATATTTTGATGATTATGGCACACAAAGCCTATGGTGACAGGCAGGCCATGATTGAGGCTGGGATTGTCTCGTCATTGCTTGAGTTGATGCTTCTGGGTACTGCGTTGGCACAGAAAAGGGCCTCGAGAATATTGGAATGCTTGAGAGTAGACAAAGGAAAGCAGATATCTGGGGGTTCTGGTGGAAACTTCAGCTCAACTCTATCTGCTCCCATTTGTGGCTCTTCCTCATCTTGTACGAAGCCAGATGGAAGTGGAAGGGAGTGTTTGGAAGAGGAGGAAGATATGATGAGTGACGAGAAGAAGGCTGTGAAGCAATTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTGAAAAGGGCCAATTTGCCTCAAGATTTCATTGAAGAGAATGAATCACTAAACACAGATCTGAATGGAATGGTTGGATGA 1521 0.4615 MAKYHRNNVGSLVLDNHDATRNATVGAHYRIWNAFSASTIRRIIFDAVSCGCGSRHHRHHRNDFASAPSPISSDSGNSKDKSREQRQSASKSKPKPNVKSEKLSDLLNIAESEIDAETKKKEEALQELKRTVKELQVEDLTKRDMAAASMRLLAKEDSEVRGTLAMLGAIPPLVGMLDLEDVSSQISSLYALLNLGIGNDANKAAIVQVGAVHKMLKLIESPTGPDSSVSEAVVANFLGLSALDDNKPIIGSSGAIPFLFRTLENSHKKTSPQAKQDALRALYNLSIFPANISFILETNLVLFLINSIGDMEVSERILSIISNLVSIPEGRKAVSAVRDAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIVSSLLELMLLGTALAQKRASRILECLRVDKGKQISGGSGGNFSSTLSAPICGSSSSCTKPDGSGRECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFIEENESLNTDLNGMVG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2160 506 SMART arm_5 288 326 IPR000225 GO:0005515
Alju07g2160 506 SMART arm_5 243 287 IPR000225 GO:0005515
Alju07g2160 506 SMART arm_5 370 411 IPR000225 GO:0005515
Alju07g2160 506 SMART arm_5 199 242 IPR000225 GO:0005515
Alju07g2160 506 SMART arm_5 157 197 IPR000225 GO:0005515
Alju07g2160 506 Coils Coil 448 471 - -
Alju07g2160 506 Gene3D - 98 268 IPR011989 -
Alju07g2160 506 MobiDBLite consensus disorder prediction 77 102 - -
Alju07g2160 506 SUPERFAMILY ARM repeat 132 409 IPR016024 -
Alju07g2160 506 Coils Coil 100 138 - -
Alju07g2160 506 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 25 497 - -
Alju07g2160 506 MobiDBLite consensus disorder prediction 56 102 - -
Alju07g2160 506 Gene3D - 269 419 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2160 Alju-ChrAlju07 47719395 47722300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2160 245 423 U-box Gene Family AT2G23140 25.414 3.78e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2160 07 47719395 47722300 Alju08g0849 08 6445983 6447800 CCT