Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2153 ATGGATTTTAAGGAAGAAACGCTTCAATCAGAGTTGAAACGTGTGAGAGATGAGAATGACACTTTAAAACTGATGCTTCAAGTTCTGAACAGCAAATACCAAAAGGTTCAGTCTCAGCTTGAAGAAATAAGAGGATGGGACGCCAAGATTCAAATCGCATCATCAGTTTCTGATTACGATATTACGAACAATAAGAGACCAAGAATTGAGTTGCCCATAGCTCATAAACCACTCCAGATCTTCGCCAGAACCCATCCCAAGGATAACAGTATGATAGTAAGAGATGGATATCAGTGGAGGAAGTATGGCCAGAAGGTTACAAAAGATAATCCATCGCCTCGAGCTTACTTCAGATGTTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAGGTACAAAGATGCGTGCAAGACAGGTCGATCCTAGTGGCAACTTATGAAGGAGAACACAACCATGGGGTTTTTGGTCCTAAAACTCCCAAAAGCTCAATTGTTGACGACAAAGAAGCGACCAACTTTAATGATGTTAGGATTCTGACAGATAGAAGACACAGTACTGAGGATCTGAGCAACGTCAGAATTGAACAATTTGTAGGTTCTCTCATCAAAGATCCCAACTTCACCGTATCCTTAGCCGAAGCAGTTGCACGCTCCATCAATACCCAACAACAACGTAAGCAACAAGGCCTTGACCTTAATTTGAGTCTTGCTGAAGTGTAA 717 0.4184 MDFKEETLQSELKRVRDENDTLKLMLQVLNSKYQKVQSQLEEIRGWDAKIQIASSVSDYDITNNKRPRIELPIAHKPLQIFARTHPKDNSMIVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCVQDRSILVATYEGEHNHGVFGPKTPKSSIVDDKEATNFNDVRILTDRRHSTEDLSNVRIEQFVGSLIKDPNFTVSLAEAVARSINTQQQRKQQGLDLNLSLAEV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2153 238 Pfam WRKY DNA -binding domain 95 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g2153 238 Gene3D WRKY domain 81 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g2153 238 SMART WRKY_cls 93 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g2153 238 Coils Coil 5 32 - -
Alju07g2153 238 SUPERFAMILY WRKY DNA-binding domain 89 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g2153 238 ProSiteProfiles WRKY domain profile. 88 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g2153 238 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 43 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2153 Alju-ChrAlju07 47622797 47624112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2153 8 214 WRKY Transcription Factor Family AT1G80840 36.226 5.61e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju07g2153 WRKY 9.3e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2153 07 47622797 47624112 Alju08g0860 08 6542904 6544142 CCT