Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2119 ATGAAGAAGCTGATCGTCTTGTTCATGTGGGCTTTGTGTTGTTCCCTGAGCAGCATGGCACAGACAAACGAAAGCGTGCCAGTAAAAGTAGGAATCGTACTTGATCTTTCTTCTCCGGCCGCAAAGATGGGCTTGAGCTGTATCAACATGTCCCTCTCTGACTTTTATGCCTCTCATTCTCATTACAAAACCAGGCTCGTCTTCAACGTTAGGGACTCTCACTCAGATGTTGTTTCTGCAGCTTCTCAAGCTCTAGATCTCATAAAGTCAGAGAAAGTGCAAGCCATAATAGGTCCATTCACGTCAATGGAGGCCATCTTTTTGATCAGTCTGGGAGACAAAGCTCATGTTCCCATCATAACCTTTTCAGCAACAAGTCCTTCTCTGGCTTCCCTTCCAAGTTCATATTTTTTCCGAATTGCACAGACCGATTCAGCTCAAGTGAACGCCATTGGAGCAATCGTACAAGCTTTTGGGTGGAAAGAAGCAGTGCCCATTTACACAGACAACGAGTATGGGAAAGGGGTCATACCATTTTTGACCAATTCTCTTCAACAAGTTTACGTTCGAATCCCATATCAGAGTTCTATTTCAGCTTCAGCCACTGATGAAGATATCAGAGCAGAGCTCTACAAGTTAATGACCATGCAAACCAGAGTGTTTGTTGTGCACATGACCCCAAATCCAGGCGTGCGACTCTTCACCATTGCAAAACAGATTGGAATGATGAGCAAGGGTTATGTTTGGATCGTAACAGATGGTTTAGCTAATGGATTAAGCTTTTTGAATTCCTCAGTCATAGAATCAATGGAAGGAGTGTTGGGTGTGAGGACCTATATTCCCAAAACAGAGCAGTTAGATGAGTTTAAAGTTCGATGGAAAAGAAGATTCCTACAAGACAATCCTACCCTCGTTGACACAGATTTGAATGTTTTTGGGGTATGGGCTTATGATGCTGTCACAGCATTAGCTATGGCTATTGAGAAAGTTGATACCAACAATCTTGGTTTTGCTATGACCAATGCTACTTCATCCAACTCAACTGATTTGGAAAGGATTGGAGTTTCAAAAAGTGGTGAAAAGCTTCGTGAAGACTTGTCAAACACTACATTTACAGGACTAAGTGGAGAATTCAGCATTGTTAACAGGCAATTGCAAGCTTCAACCTTTGAGATATTGAATGTGATTGGGAATGGAGGAAGAACAATAGGGTTTTGGACACCACAAAATGGAATAGTCAGAAATCTAAACTCAACTAAGACCAAGATGTATTCTACGTCAAGTAAGGATCTTGGAACAATCATATGGCCTGGGGACACGAACTCTGTTCCAAAGGGATGGGAAATTCCCACAAATGCGAGGAAGTTAAGGATAGGGGTTCCAGAGAAAAATGGTTATCCTCAATTCGTAAAAATATCTTATGATCCCATCACTAATACAACAGAGGTCACTGGATTTTGCATTGATGTGTTCAAAGCAGTGTTGGAAGTTCTCCCTTATGCCTTACCCTATGAATTTATTCCTTTTGCCAAACCAAATGGCGATAGTGCAGGATCATACAATGAGCTGATTAGCCAAGTTTATTTTGGGAACTTTGATGCTGTGGTGGGGGATGTAACAATTATAGCAAACAGGTCTAACTATGTGGATTTCACTTTGCCGTACACTGAATCTGGTGTAACAATGGTAGTTCCAGTAAAAGACAAAAGGAAGAAGAATGCTTGGGCCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTAACAATAGCTTGTTCCTTTGTATTCATTGGGTTTGTTGTGTGGGTGCTTGAACACAGAATAAACGAACATTTTAGAGGACCCCCATCTCACCAGATTGGAACAAGCTTATGGTTTTCATTCTCGACCATGGTTTTTGCACATCGAGAAAAAGTGGTGAGCAACCTGGGTAGATTTGTGGTGATTATATGGGTTTTTGTGGTTCTAATTCTGGTTCAAAGCTACACTGCTAGTTTGACCGCACTTTTGACGGTTGAGCAGCTCAACCCAACTGTAACTGACGTTAATTTACTGATAACGAAGAGAATGAATGTTGGTTACAAGCAAGGTTCGTTTGTGCTTGAAATCTTGAAGGAAATGGGTTTCCTTGATTACCAACTTAAAACATATAAATCCCCGGAGGAATGCAACGAACTGTTTGAAAGAGGAAATGCAAATGGTGGCATTGCAGCTGCATTTGATGAAGTGCCTTACGTTGTCAAATTCTTCCTTCAAAGTTATTGTTCTAAGTATGCCATGCTTGAGCCAACTTTTAAAACTGGCGGCTTTGGATTTGTGTTCCCCAAAGGTTCTCCTCTTGTGGCTGACATTTCAAGGGCAATCTTGAATGTTACACAAGGAGATAAAATGAAGGTGATAGAGAATGCTTGGTTCAGAAAAAACAACTGCCCAGGTTCTGATACCTCAATTTCATCAAACAGTCTTGGACTTGAAAGCTTCTGGGGACTATTTCTCATTGTAGGGGTTACTTCTGCTGTGGCTCTAACTGTCTTCGCCGTTAACTTCCTATATCAGCACAAGCAAATCTGGTTGCATAATGATCCCAATACCTCAAAGTGGAAACGAATTGGGGAGTTGATAGACAAGTTTGACCAGAGGGACATGAGTTCTCACACCTTCAGAAAAAGGGAAATGCAGAATAATAGTGAAGATTATAGCAGACATGATATATGTGAAGTTGAGGCATCTCCACCTACAAATTGCCCTCCAAGTCCATCTGAATCAGAATCAATTTTCTCGTTTCATAGCGAGGCTAGCCCTAATAGGCCAGCACCACAAGACACACAAATAAAAGAGCCTTAG 2841 0.4146 MKKLIVLFMWALCCSLSSMAQTNESVPVKVGIVLDLSSPAAKMGLSCINMSLSDFYASHSHYKTRLVFNVRDSHSDVVSAASQALDLIKSEKVQAIIGPFTSMEAIFLISLGDKAHVPIITFSATSPSLASLPSSYFFRIAQTDSAQVNAIGAIVQAFGWKEAVPIYTDNEYGKGVIPFLTNSLQQVYVRIPYQSSISASATDEDIRAELYKLMTMQTRVFVVHMTPNPGVRLFTIAKQIGMMSKGYVWIVTDGLANGLSFLNSSVIESMEGVLGVRTYIPKTEQLDEFKVRWKRRFLQDNPTLVDTDLNVFGVWAYDAVTALAMAIEKVDTNNLGFAMTNATSSNSTDLERIGVSKSGEKLREDLSNTTFTGLSGEFSIVNRQLQASTFEILNVIGNGGRTIGFWTPQNGIVRNLNSTKTKMYSTSSKDLGTIIWPGDTNSVPKGWEIPTNARKLRIGVPEKNGYPQFVKISYDPITNTTEVTGFCIDVFKAVLEVLPYALPYEFIPFAKPNGDSAGSYNELISQVYFGNFDAVVGDVTIIANRSNYVDFTLPYTESGVTMVVPVKDKRKKNAWAFLKPLTWDLWVTIACSFVFIGFVVWVLEHRINEHFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNLGRFVVIIWVFVVLILVQSYTASLTALLTVEQLNPTVTDVNLLITKRMNVGYKQGSFVLEILKEMGFLDYQLKTYKSPEECNELFERGNANGGIAAAFDEVPYVVKFFLQSYCSKYAMLEPTFKTGGFGFVFPKGSPLVADISRAILNVTQGDKMKVIENAWFRKNNCPGSDTSISSNSLGLESFWGLFLIVGVTSAVALTVFAVNFLYQHKQIWLHNDPNTSKWKRIGELIDKFDQRDMSSHTFRKREMQNNSEDYSRHDICEVEASPPTNCPPSPSESESIFSFHSEASPNRPAPQDTQIKEP 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2119 946 MobiDBLite consensus disorder prediction 918 939 - -
Alju07g2119 946 Pfam Receptor family ligand binding region 47 397 IPR001828 -
Alju07g2119 946 PIRSF IGluLR_plant 1 939 IPR017103 -
Alju07g2119 946 Gene3D - 456 573 - -
Alju07g2119 946 CDD PBP1_GABAb_receptor_plant 29 416 IPR044440 -
Alju07g2119 946 FunFam Glutamate receptor 2.7 711 811 - -
Alju07g2119 946 SUPERFAMILY Periplasmic binding protein-like I 27 438 IPR028082 -
Alju07g2119 946 SUPERFAMILY Periplasmic binding protein-like II 433 807 - -
Alju07g2119 946 FunFam Glutamate receptor 574 704 - -
Alju07g2119 946 Pfam Bacterial extracellular solute-binding proteins, family 3 479 805 IPR001638 -
Alju07g2119 946 SUPERFAMILY Voltage-gated potassium channels 585 670 - -
Alju07g2119 946 MobiDBLite consensus disorder prediction 889 904 - -
Alju07g2119 946 Gene3D - 745 811 - -
Alju07g2119 946 Pfam Ligand-gated ion channel 806 835 IPR001320 GO:0015276|GO:0016020
Alju07g2119 946 Gene3D - 57 149 - -
Alju07g2119 946 FunFam Glutamate receptor 455 574 - -
Alju07g2119 946 Gene3D - 352 455 - -
Alju07g2119 946 FunFam Glutamate receptor 318 454 - -
Alju07g2119 946 FunFam Glutamate receptor 149 307 - -
Alju07g2119 946 Gene3D - 574 705 - -
Alju07g2119 946 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 883 IPR015683 -
Alju07g2119 946 Gene3D - 150 309 - -
Alju07g2119 946 CDD GluR_Plant 454 804 - -
Alju07g2119 946 MobiDBLite consensus disorder prediction 889 946 - -
Alju07g2119 946 SMART GluR_14 455 806 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2119 Alju-ChrAlju07 47369921 47373562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2119 6 920 Ion Channels AT2G29120 52.552 0.0 947