Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2118 ATGATGAACAAGTTCATGTGCCTTCTGCTCTTCCTTATCTGGACTCTTACTTGTTTCCTGTGCGTAGCACTAGCTCAGACAAACGCGACTGTGCCGGTGAAAGTAGGAATCGTACTTGATCTCTCGTCTTCTACAGCAAAGATAGGTTGGAGCTGTATCAACATGTCCCTCTCTGACTTCTATGCCTCTCATTCTCATTGCAAAACCAGGCTCGTCTTCATCCTCAGGGACTCCCAAAGAGACATCGTTACTGCTGCTGATCAAGCTATTGACCTCATCAAAACAGAGCAAGTGCAAGCCATAATAGGACCATCGACATCAATGGAGGCCAACTTTGTGGTTAGTCTTGGAGCCGAAGCTCACGTGCCCATCGTAACCTTCTCTGCAACGAGTCCTTCTCTCTCTTCTGTTGGGAGCCAATACTTCTTTCAGATTGCACAGAACGATTTGGCTCAAGTGAATGCCATTACCGCAATCGTGCAAGCTTTTGGGTGGGAAGAGGCTGTGCCCATTTACGTCAACGACGATTATGGAAAAGGGGTCACACCCTTCTTAACTAACTCTCTTCGACAAGCCTATGTTCGAATCCCAGTTATGAGTGCCATTTCACCTTCAGCCACCGACGAAGAAATAAAAACAGAGCTCTCCAATTTGATGACGAATCAAACCAGAGTGTTCGTTGTGCACGTGTCCTCCGATATTGGTATACGTCTCTTCTCCATCGCAAAACTGATTGGTATGATGAACAGAGGCTATGTTTGGATCGTAACCGATGGTTTGGGTAATATGTTGAATTCCTTCGACTCCTCAGTCATAGAATCAATGCAAGGAGTATTGGGTGTTAAGAGTTATGTTTCTAGAACAAAAAAGCTAGATGATTTTGAAGTCAGATGGAAAAGAAAGTTCATACAAGACAATCCAACCCTTGCTGGAATTAATCTGAATGCGTTTGGATTACGGGCTTATGATGCTACCACAGCTTTAGCCATGGCCGTAGAGCAAGTCGGCATCGGCAATCGCGGCTTCGACATGAGTAACGTTTCAGGTAATTCTTCCGATCTTGAAAGCTTGGGAGTTTCAAGAAATGGGGAAAAGCTGGGGGAAGCCATATCCAGAATCAAATTTAGAGGCCTGGGTGGAGAATTCGGTGTTGTTAATGGACAATTGCCAGCATCAGCGTTTGAGATAGTAAATGTGGTTGGTAATGGTCAAAGAACGATAGGATTTTGGACAACACAAAATGGACTTGTTCGAAATCTGAGTTGGAGGAACACCAGCACATATTCTACATCAAAGAAGGATCTAGGTGAAGTAATGTGGCCAGGGGATACAAATTCTATTCCAAAGGGTTGGGAAATCCCTGTAAAAGGAACAAAGTTGAGGGTAGGCGTAGCAGTGAAAGCGGGTTACACGGAATTCGTGAAGGCAATACTTAATACAACCACAAATCGACCAGAAATCACAGGATTCTGCACCGACGTGTTCAAGGCTGTGGTCCAAGCATTGCCTTATGCCCTGCCATATGAACTCATCCCATTTCCTAAGATGGAAGCTGTGATTAGTACAACTCCAATATACGACGACCTTATCACACAAGTATATTTAGGGAACTTTGATGCGGTGGCGGCGGATGTGACGATCATAGCGAACAGGTCGAACTATGTGGATTTCACTTTGCCATACACCGAATCTGGTGTAACAATGATAGTTCCATTGATAGACAAGAGGAAGAAGAATGCATGGGCCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTGACCAGTGCTTGTTCCTTTGTATTTATTGGGTTCGTTGTGTGGGTGCTTGAGCACCGAGTAAACGAACATTTCCGAGGACCTCCTTCACATCAAATTGGAACCAGCTTATGGTTTTCTTTCTCAATCATGGTTTTTGCCCATAGAGAGAGAGTGGTGAGCAACTTGGGTAGATTTGTGGTGATTATATGGATATTTGTAGTTCTAATTCTGATTCAGAGTTATACTGCAAGTTTGACGTCGCTCATGACAGTTGAACAGCTTAGCCCAACTGTGAAGGACGTGAGTCTACTTATAAAGAACAGATTGAATGTTGGTTATATGGAAGGTTCTTTTGTACACGGAGTTTTAACGGAGATGGGTTTTCAAGATTACCAACTCAAAATTTATAATTCCACTGAAAGTTGCCATAAATTATTTGAGAAAGGTGTTGAAAATGGTGGAATTGCTGCTGCGTTTGATGAAATCCCATACGTAAAACTCTTTCTTGGGAAGTATTGCTCCAAGTATATGATGGTTGATCCGACTTTCAAAACTGGGGGCCTTGGCTTTGTATTTCCAAAAGGTTCTCCCCTTGTGGCTGACATGTCAAGAGCGATCCTGAACGTGACACAAGGGAATAAAATGAAAAGAATAGAGAGTGAATGGTTCAACGGAAGTAACTGCCCAGATTCGAAGGCCTTAGTTTCTTCAAATAGCCTAGGCCTTGAGAGCTTCTGGGGCTTATTTCTCGTAGCAGGACTTGCATCTATACTAGCACTCATAATCTTCGTCGTCACATTCCTATACCAGAACAGAACCATCTGGTCAGGCTATAGTCCGGGCAGTACATCAGTATGGAGGCAGATAAAGATGTTGGTGAAGATTTTTAACGAGAGAGACGAAAGCTCTCACACTTTCAAGAAAAAGGGAAGTGGGAGTAGCCATCATGATGGGTTGGGTGCAGTTGAGGCGTCTCCAACGTCACAGTGTCCACCAAGTCCTTCAAGTGAAGGTGATGAATCTGAGTTTCCCTTTAATGGAGACGGTGCTGTGACTGCTCATGAGTTTCGTGGTGAGGCTAATAATGCAAATGCCGTTCTGCCTCAAAACGTAGAAATAACCGTCAGCCACTGGATACGGCCTGCTTAA 2907 0.4396 MMNKFMCLLLFLIWTLTCFLCVALAQTNATVPVKVGIVLDLSSSTAKIGWSCINMSLSDFYASHSHCKTRLVFILRDSQRDIVTAADQAIDLIKTEQVQAIIGPSTSMEANFVVSLGAEAHVPIVTFSATSPSLSSVGSQYFFQIAQNDLAQVNAITAIVQAFGWEEAVPIYVNDDYGKGVTPFLTNSLRQAYVRIPVMSAISPSATDEEIKTELSNLMTNQTRVFVVHVSSDIGIRLFSIAKLIGMMNRGYVWIVTDGLGNMLNSFDSSVIESMQGVLGVKSYVSRTKKLDDFEVRWKRKFIQDNPTLAGINLNAFGLRAYDATTALAMAVEQVGIGNRGFDMSNVSGNSSDLESLGVSRNGEKLGEAISRIKFRGLGGEFGVVNGQLPASAFEIVNVVGNGQRTIGFWTTQNGLVRNLSWRNTSTYSTSKKDLGEVMWPGDTNSIPKGWEIPVKGTKLRVGVAVKAGYTEFVKAILNTTTNRPEITGFCTDVFKAVVQALPYALPYELIPFPKMEAVISTTPIYDDLITQVYLGNFDAVAADVTIIANRSNYVDFTLPYTESGVTMIVPLIDKRKKNAWAFLKPLTWDLWVTSACSFVFIGFVVWVLEHRVNEHFRGPPSHQIGTSLWFSFSIMVFAHRERVVSNLGRFVVIIWIFVVLILIQSYTASLTSLMTVEQLSPTVKDVSLLIKNRLNVGYMEGSFVHGVLTEMGFQDYQLKIYNSTESCHKLFEKGVENGGIAAAFDEIPYVKLFLGKYCSKYMMVDPTFKTGGLGFVFPKGSPLVADMSRAILNVTQGNKMKRIESEWFNGSNCPDSKALVSSNSLGLESFWGLFLVAGLASILALIIFVVTFLYQNRTIWSGYSPGSTSVWRQIKMLVKIFNERDESSHTFKKKGSGSSHHDGLGAVEASPTSQCPPSPSSEGDESEFPFNGDGAVTAHEFRGEANNANAVLPQNVEITVSHWIRPA 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2118 968 SUPERFAMILY Periplasmic binding protein-like II 438 811 - -
Alju07g2118 968 PIRSF IGluLR_plant 1 935 IPR017103 -
Alju07g2118 968 CDD PBP1_GABAb_receptor_plant 34 420 IPR044440 -
Alju07g2118 968 CDD GluR_Plant 459 809 - -
Alju07g2118 968 FunFam Glutamate receptor 323 458 - -
Alju07g2118 968 Gene3D - 460 579 - -
Alju07g2118 968 Gene3D - 369 459 - -
Alju07g2118 968 SUPERFAMILY Periplasmic binding protein-like I 33 452 IPR028082 -
Alju07g2118 968 Gene3D - 580 711 - -
Alju07g2118 968 MobiDBLite consensus disorder prediction 890 934 - -
Alju07g2118 968 Pfam Ligand-gated ion channel 811 841 IPR001320 GO:0015276|GO:0016020
Alju07g2118 968 FunFam Glutamate receptor 580 710 - -
Alju07g2118 968 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 887 IPR015683 -
Alju07g2118 968 FunFam Glutamate receptor 148 302 - -
Alju07g2118 968 Gene3D - 151 313 - -
Alju07g2118 968 SMART GluR_14 459 811 IPR001320 GO:0015276|GO:0016020
Alju07g2118 968 MobiDBLite consensus disorder prediction 912 926 - -
Alju07g2118 968 FunFam Glutamate receptor 2.7 717 816 - -
Alju07g2118 968 FunFam Glutamate receptor 459 580 - -
Alju07g2118 968 Gene3D - 758 816 - -
Alju07g2118 968 Pfam Bacterial extracellular solute-binding proteins, family 3 484 810 IPR001638 -
Alju07g2118 968 Pfam Receptor family ligand binding region 53 401 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2118 Alju-ChrAlju07 47360018 47363391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2118 3 942 Ion Channels AT2G29120 48.462 0.0 877