Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2116 ATGGTTTGTGAGATGGAGCATGACCTTTTGGAGGACATGGACATAGAAGTCCTCCCTTCAATGTGGCCAGAAGATATTGGAGCTGATGCTGGGAAACAGTTCAACATAGAGAAGCCTGGAAGTGACCAAGACATGTTAGAGGAGGTCACAATAGTGGAGGAGCCAACTATAGTAGATTTCAAGCGTCTCATGGAGCTCACTAACTATACAGACAGAGGGTCAACTCAGTTGACCTATTTCATGAAATACTTGGAGTACAAGCAGGCTAATGCTGTGCGTCTCCTGCGAGAAGAACTCGACAACCTAAGCAAACAAAGACAGGAAGTTGAGCTGAGGAAGTTGAAGATATTGGAAGAGCACCGGTTCGAGGACATAAGATATGGGGATGATAAAAGATCAGTTTCTATATTGGATGAAGTTTATGACATATGGCATGATAGGCCTCGCAGGAAAAATGATGTTGTTGTTCAGAACAAGGGTATTGAAATAGATGCCGAGTATGATACTGTTGTGTACTGGAAGCAAAGGGCCCTACATTTGGAAAAATTGTTGGAGGCAAGTACTCAGAGAGAGCAGACACTTATGGAGAAGCTGGAAGAAAGCATAAAGAATCTTGAGAGACAGTCCACTCCTGTAGAAGAATTGTCACAGATTCTGAAAAGAGCAGATAATTTCTTGCATTTTATTCTGCAGAATGCACCAGTTGTCATAGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAACCATTTCCCAAGATTGCAGGAGGAGGACATCATAGGAAGAACAGATGTGGAAATTTTCACGGGGTCTGGAGTTAGGGAATCTCAAGATTTTAAGAGAGAAGTTCTGGAAAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTAATCTATGTAGAACCTGTCTTTAGCAAAGCAGGGGAGACAATTGGGATAAATTACATGGGAATGGATGTAACTGATCAGGTGAGAAAAAGAGAAAGAATGGCACAGATTAGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAGACTGAATTAAATAAGACCATTCACATTACAGAGGAGACTATGCGAGCAAAACAAATGCTAGCGACCATGTCCCATGAAATAAGATCTCCACTGTCTGGGGTTGTTAGCATGGCTGAGATTCTTTCTACTACAAAACTTGACAAGGAGCAAAGACAGCTCTTGGAAGTCATGCTTTCCTCAGGAGATTTGGTTCTTCAACTTATAAATGACATATTAGATCTTTCCAAGGTTGAGTCAGGAGCCATGAAGTTGGAAGCTACCAAATTCCGTCCAAGAGAGGTAGTGAGGCATGTACTACAGACTGCTGCAGCATCATTGCAGAAAACATTAACCCTAGAAGGTCATGTGGCTGATGATGTACCTATTGAGGTCACTGGAGATGTTTTAAGGATTCGGCAAATTCTCACAAACCTCATAAGCAATGCAATCAAGTTTACCCATGAAGGTAAAGTTGGCATAAATCTCTACGTTGTAGCACAGCCCAATTTTGGACAATCAGAAGAAGGTCTCCAAAAGATTAGTGGAGACAAGTCAAATGTATCAGTGAGTGGATTATCAGAAGAGAAATACTTCTCAGCATCTCAAAATGGGAGTAGTGATGAATGTAGATCTCCCGTTAAAAGCGAATGCTCAAGGAATGGGGATGCAGAGGAGCAACCTCATTCAACCGAAACTACAGTTTACATACGTTGTGATGTATATGACACTGGAATTGGAATACCAGAAAAAGCAATTCCTACTTTATTTAAAAGGTACATGCAAGTCAGTGCAGATCACGCTCGAAAGTATGGTGGCACAGGGCTTGGACTAGCAATATGCAAACAACTGGTCGAATTAATGGATGGTCGTCTAACAGTGTCAAGCAAAGAACACTGTGGTTCTACATTTACGTTCATACTCCCGTACAAGGTTTCTATTGCCTGTGATAATTCAGATGACCCCGACGACGAGCCCTCAGATATGGAGAACGACGACGCTGCTTCTGATGACGCCACACAAGGATTCTTCCAATTCCAACCACGTACATTGGGCTCACTTTTCTCCTCCAACGGATCTACCAGGGCCCCAAAGTTGTTACCCCATAAACTTGGGCTCACACTCCCTCATAACTTCAATGGGTTTTCGCAGAATTCTTACTCTCTACCCTCTAACGACGTCGCTTCAAATGGAACAACTTCAGTTGAAGATGTAATACGAGTGACGACAGTAACGAGCTCGCCGGAGATGTCTGAATCAGGAAGCTCAACGACTCATAAGCCAGAAACAGAGAATGAAAAAGTAGTTAGTAGAGAAAAATGTGTTCAGATCAGAGAAATTGGTGTGGAAACAAGGACAAGCAAAATCCAGCAATCAAGCGAGACACAAGAGAAGGATAGCAGAACTTGTCAATGTGTTACTAGTAGAAGTGACAGTACATCAACAGTGGCCAAACCTCCATTAGAGCCGAAGATCCTTCTAGTTGAAGATAACAACGTCAACGTTATGGTGGCACGCTCGATGATGAAGCAGTTAGGTCACACCATAGATGTGGTCAACAATGGAGTGGAAGCTGTTCGTGCAGTTCAGCGCATTAATTATGACCTCATTCTGATGGATGTGTGCATGCCAGTTATGAATGGTCTTGAAGCAACAAAATTGATTCGCTCTTATGAGGAAACAGGCAATTGGGATGCTGCAACAAAAGCTGGAATTGAGCCAAGCATTTCAACTTCTGAGCATTCCACAAAGCGAATGCCCATTATTGCAATGACGGCGAATGCTTTGTCAGAGAGTGCGGAAGAGTGTTACGCAAATGGAATGGACTCATTTGTGTCAAAACCTGTGACTTTCCAGAAATTGAAGGAGTGCCTTGAACAATTCCTACGGTGA 2937 0.4256 MVCEMEHDLLEDMDIEVLPSMWPEDIGADAGKQFNIEKPGSDQDMLEEVTIVEEPTIVDFKRLMELTNYTDRGSTQLTYFMKYLEYKQANAVRLLREELDNLSKQRQEVELRKLKILEEHRFEDIRYGDDKRSVSILDEVYDIWHDRPRRKNDVVVQNKGIEIDAEYDTVVYWKQRALHLEKLLEASTQREQTLMEKLEESIKNLERQSTPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPRLQEEDIIGRTDVEIFTGSGVRESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAQIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVRHVLQTAAASLQKTLTLEGHVADDVPIEVTGDVLRIRQILTNLISNAIKFTHEGKVGINLYVVAQPNFGQSEEGLQKISGDKSNVSVSGLSEEKYFSASQNGSSDECRSPVKSECSRNGDAEEQPHSTETTVYIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMDGRLTVSSKEHCGSTFTFILPYKVSIACDNSDDPDDEPSDMENDDAASDDATQGFFQFQPRTLGSLFSSNGSTRAPKLLPHKLGLTLPHNFNGFSQNSYSLPSNDVASNGTTSVEDVIRVTTVTSSPEMSESGSSTTHKPETENEKVVSREKCVQIREIGVETRTSKIQQSSETQEKDSRTCQCVTSRSDSTSTVAKPPLEPKILLVEDNNVNVMVARSMMKQLGHTIDVVNNGVEAVRAVQRINYDLILMDVCMPVMNGLEATKLIRSYEETGNWDAATKAGIEPSISTSEHSTKRMPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLKECLEQFLR 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2116 978 CDD HisKA 373 432 IPR003661 GO:0000155|GO:0007165
Alju07g2116 978 SMART HKATPase_4 482 660 IPR003594 -
Alju07g2116 978 Coils Coil 92 119 - -
Alju07g2116 978 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 658 IPR003594 -
Alju07g2116 978 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Alju07g2116 978 CDD HATPase_EvgS-ArcB-TorS-like 487 657 - -
Alju07g2116 978 FunFam Putative histidine kinase 5 359 436 - -
Alju07g2116 978 ProSiteProfiles Response regulatory domain profile. 839 977 IPR001789 GO:0000160
Alju07g2116 978 MobiDBLite consensus disorder prediction 667 683 - -
Alju07g2116 978 Coils Coil 188 215 - -
Alju07g2116 978 MobiDBLite consensus disorder prediction 561 575 - -
Alju07g2116 978 MobiDBLite consensus disorder prediction 800 821 - -
Alju07g2116 978 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 11 977 - -
Alju07g2116 978 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Alju07g2116 978 MobiDBLite consensus disorder prediction 665 684 - -
Alju07g2116 978 PRINTS Bacterial sensor protein C-terminal signature 585 599 IPR004358 GO:0016310|GO:0016772
Alju07g2116 978 PRINTS Bacterial sensor protein C-terminal signature 620 638 IPR004358 GO:0016310|GO:0016772
Alju07g2116 978 PRINTS Bacterial sensor protein C-terminal signature 644 657 IPR004358 GO:0016310|GO:0016772
Alju07g2116 978 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 658 IPR036890 -
Alju07g2116 978 CDD REC_hyHK_CKI1_RcsC-like 840 973 - -
Alju07g2116 978 Gene3D - 836 978 - -
Alju07g2116 978 Gene3D - 437 663 IPR036890 -
Alju07g2116 978 SUPERFAMILY PYP-like sensor domain (PAS domain) 215 333 IPR035965 -
Alju07g2116 978 SMART REC_2 838 973 IPR001789 GO:0000160
Alju07g2116 978 SUPERFAMILY CheY-like 838 978 IPR011006 -
Alju07g2116 978 MobiDBLite consensus disorder prediction 547 578 - -
Alju07g2116 978 MobiDBLite consensus disorder prediction 760 785 - -
Alju07g2116 978 ProSiteProfiles Histidine kinase domain profile. 378 660 IPR005467 -
Alju07g2116 978 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Alju07g2116 978 FunFam Histidine kinase 5 213 348 - -
Alju07g2116 978 Gene3D - 358 436 - -
Alju07g2116 978 Gene3D PAS domain 212 348 - -
Alju07g2116 978 FunFam Histidine kinase 5 832 978 - -
Alju07g2116 978 Pfam Response regulator receiver domain 840 973 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2116 Alju-ChrAlju07 47340648 47345203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2116 1 977 Histidine Kinase Gene Family AT5G10720 59.838 0.0 1138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju07g2116 HATPase_c 8.8e-27 CL0025