Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2110 ATGGCTGATTCCGACCACATTCTGAGAACTACCAGCGACTCCGGTAAGTACAAGGGCGTCAGAAAGCGAAAATGGGGCAAATGGGTGTCCGAAATCAGACTTCCCAACAGCCGCGAGCGCATTTGGCTCGGCTCCTATGATTCGCCGGAGAAGGCCGCTCGAGCCTTCGACGCCGCCCTATACTGCCTCCGCGGCCAAAATGCCAGCTTCAACTTCCCCGACACTCCTTTGGAGTTGGACAATATCACTGTTTCCGGTGATCATCATCGCCAATCTCGTTCTCCTCAAGAAATCCAAGAGCTCGCTGCTAGGTTTGCCAACGAATACCAGCGGGACCCACCAATAATGGTTCAGCAATCTTCAGAAACAGCAGCTCCTTCTTCCTGCGAATCAGATGGGGTTGCTGAGAGTGGTGATCCTGTGGAGGTGGACAACGGGGTCGGGGACACAAGGGGCATTAACGACTGGTCGTTTTTGAAGTCATTGGATGAGACTGACTCAGCCAATAATAGTAACCATAATTATAATGGTTTCTACTCTGGATTCGAGAAGATGCATTTTGGTGAGTTATTGTTTCCCACATCACCGCCTCATTTGCTTGTTGACTATCATGTTAGTGACAATAATGGGGACGCTATGGAATGCGATGACGCTTTTTCCCAACAATCATTGTTCCTCTGGAACTTTTGA 690 0.4957 MADSDHILRTTSDSGKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGQNASFNFPDTPLELDNITVSGDHHRQSRSPQEIQELAARFANEYQRDPPIMVQQSSETAAPSSCESDGVAESGDPVEVDNGVGDTRGINDWSFLKSLDETDSANNSNHNYNGFYSGFEKMHFGELLFPTSPPHLLVDYHVSDNNGDAMECDDAFSQQSLFLWNF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2110 229 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Alju07g2110 229 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Alju07g2110 229 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Alju07g2110 229 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
Alju07g2110 229 FunFam Ethylene-responsive transcription factor 2 16 74 - -
Alju07g2110 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 154 - -
Alju07g2110 229 SUPERFAMILY DNA-binding domain 16 74 IPR016177 GO:0003677
Alju07g2110 229 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Alju07g2110 229 MobiDBLite consensus disorder prediction 117 147 - -
Alju07g2110 229 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Alju07g2110 229 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2110 Alju-ChrAlju07 47259451 47260140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2110 10 229 AP2-EREBP Transcription Factor Family AT1G19210 43.612 3.62e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju07g2110 AP2 1.9e-12 CL0081