Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2088 ATGATAGCTTACCTGGAGCACTTCGTTCACGGAACTGACAAAGAATCAAGGCCCGACGATGACTTAGTCGTCGGCCTCTCCGAAGCGCTTGACCTTCAAGGCACCGTCGACTGTGCACCCAACGGCATGGCCAGTAAAGATTTCGGAGGCTTGCAGTCCGTGAAGCCCTTGGCCCTCATCAAGCCGACCGCCGCCGACGACATCGCTCGGGTCCTCAAAGCGGCAGCTCGGTCGTCGAATCTGACGATTGCTGCTCGAGGCAACGGCCACTCAATTAACGGCCAGGCTATGGCCGATCAAGGCATCGTCCTGGACATGCGCAGCATGGAGGAGAATATTCGCGTGGTGCGGAGTAGTAATGGCTCAGCCTACGTCGACGTTTCGGCAGGGGCATTATGGGAAGACGTCCTGAAACGGTGCGTACGGGTTGGGTTGGCCCCAAGGTCGTGGACGGATTATCTGGGGTTAACGGTTGGAGGGACGCTTTCTAATGCTGGGGTCAGCGGCCAAACCTTCCGTTACGGTCCCCAAACTTCGAACGTAACGGAATTGGAGGTTGTAACGGGCAAAGGCGATACGTTGGTCTGTTCCCAAACCGAAAATTCCGAACTTTTCTTTGCTGCGTTGGGTGGTCTGGGTCAGTTCGGCATCATCACCAGGGCCAGGGTCGTGCTTCAACAAGCACCAGATATGGTGAGATGGATAAGGATAGTGTACTCTGAATTTGAAGACTTCACTAGGGATGCCGAGTCGTTGATAACTCGTCAAGAAGACGACTCTTTCGATTACGTGGAAGGGTTCGTATTTGTGAACAGCGACGACCCTGCCAACGGGTGGCCCATAGTTCCATTGGACCCGGACCAAGAGTTCGACCCGAACCAAATCCCCGCCACCGCCGGCCCCGTACTTTACTGCCTCGAGCTCGCTCTTCACTGTCGTAACTCAGACCACCCTTCTGACGTCGATGCGGATGTGGATAGATTGCTTCGACGGCTGCGCTTCCTCCGGGCCTTCAAGTTCCAGGTGGACGTGCGCTACACCGAGTTCTTGCTACGTGTTAAGCGTGCGGAGGAAGAAGCTAAAGCCAACGGCATCTGGGACGCCCCTCACCCCTGGCTCAACCTCTTTGTCTCCCGCCACAACATCGTTGCTTTTGATCGTGAGGTGTTCAAGGGCATCCTCAGCCAAGGAGTAGGTGGGCCCATCTTGGTCTACCCTCTCTTACGAAGCAAGTGGGATTCTCGAACTTCGGTGGCGTTGCCGGAGAGCGACATCTTCTACATTGTGGCGCTGCTCCGATTTAACCCGCCGCCCCCAAGAGGACCGGGCCCAGAGGTGCTTGTGGCACAAAACCAAGAGATCATTCAGTTCTGCAGCAGCAGAGGGTTTGATTTCAAGCTATACCTTCCTCACTACAAGTGTCAGGAGGATTGGAAGCGACATTTTGGGAATCAATGGACCAGATTCGTGAGCAGAAAGTCCAGTTTTGATCCCTTGTTTATCCTTGCACCTGGACAGAAAATATTCTCGAGAAACCCCCAACCTTAG 1548 0.5472 MIAYLEHFVHGTDKESRPDDDLVVGLSEALDLQGTVDCAPNGMASKDFGGLQSVKPLALIKPTAADDIARVLKAAARSSNLTIAARGNGHSINGQAMADQGIVLDMRSMEENIRVVRSSNGSAYVDVSAGALWEDVLKRCVRVGLAPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTSNVTELEVVTGKGDTLVCSQTENSELFFAALGGLGQFGIITRARVVLQQAPDMVRWIRIVYSEFEDFTRDAESLITRQEDDSFDYVEGFVFVNSDDPANGWPIVPLDPDQEFDPNQIPATAGPVLYCLELALHCRNSDHPSDVDADVDRLLRRLRFLRAFKFQVDVRYTEFLLRVKRAEEEAKANGIWDAPHPWLNLFVSRHNIVAFDREVFKGILSQGVGGPILVYPLLRSKWDSRTSVALPESDIFYIVALLRFNPPPPRGPGPEVLVAQNQEIIQFCSSRGFDFKLYLPHYKCQEDWKRHFGNQWTRFVSRKSSFDPLFILAPGQKIFSRNPQP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2088 515 Gene3D - 44 510 IPR016167 -
Alju07g2088 515 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 229 509 IPR015345 GO:0009690|GO:0019139|GO:0050660
Alju07g2088 515 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 509 IPR016164 GO:0003824|GO:0050660
Alju07g2088 515 Pfam FAD binding domain 56 197 IPR006094 GO:0050660
Alju07g2088 515 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 225 IPR036318 GO:0050660
Alju07g2088 515 Gene3D - 232 468 IPR016170 -
Alju07g2088 515 PANTHER GULONOLACTONE OXIDASE 18 510 - -
Alju07g2088 515 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 228 IPR016166 GO:0071949
Alju07g2088 515 Gene3D - 106 230 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2088 Alju-ChrAlju07 47089204 47093155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2088 55 260 Miscellaneous Gene Families AT1G30730 27.103 8.41e-07 49.7