Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2085 ATGGGGAGGACTCCTTCACGCAGTAATAATAATGAAGCGCACAAAAGGGAGGCTTGGACAGCTCATGAAGACAAAATTCTGGCCTCTTATATCAGGTCCCATGGCGAAGGCAAATGGAAAAACATCCCCAAGCTAACTGGTCTCAGGAGATGTGGCAAATCTTGTAGGCTTCGCTGGATGAATTACCTTAGGCCCGACATCAAAAGAGGCAACATTACTGAAGACGAGGAAGACCTCATTCTCAGGCTTCACAACCTCCTGGGCAACAGATGGTCACTCATAGCAGGCAGACTTCCAGGGCGAACAGACAATGAAATCAAAAACTACTGGAACACCAACTTAGCCAAGAGGCGACCAAAGGATAAGAGGGAAATTGCAGAATCAAGAGTGTCCCATGAGGCTACGGAGTCGCCGAGCACTCAAGTGGTCTTGGCCACGTCAACTCCGATGGAACCCAGGACTGAGTATTGCGGCGATTCTGTTGTTGCTACAGGGGAATCTGTTGCTTTTGATGACGTCGATGGGGCTTTGATGGATTTTGATTTCAGGGATGTGGACTTTTTGGAGTTTCTGGACTTTGATTTTTCCGGACTTGAAGATTTTGATATGTTGATGAACATGGACGATCCGAAACAAGAAGGAAGGCAGAGTGATTCTCAGTCATTTTCATTTTCTGCGGAAACAAACGCTGCGCAGGGGAACCAGAATGTCACTCATTACTATTAG 726 0.4683 MGRTPSRSNNNEAHKREAWTAHEDKILASYIRSHGEGKWKNIPKLTGLRRCGKSCRLRWMNYLRPDIKRGNITEDEEDLILRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNLAKRRPKDKREIAESRVSHEATESPSTQVVLATSTPMEPRTEYCGDSVVATGESVAFDDVDGALMDFDFRDVDFLEFLDFDFSGLEDFDMLMNMDDPKQEGRQSDSQSFSFSAETNAAQGNQNVTHYY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2085 241 MobiDBLite consensus disorder prediction 207 241 - -
Alju07g2085 241 Gene3D - 73 141 - -
Alju07g2085 241 MobiDBLite consensus disorder prediction 216 241 - -
Alju07g2085 241 CDD SANT 73 114 IPR001005 -
Alju07g2085 241 Gene3D - 7 68 - -
Alju07g2085 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Alju07g2085 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Alju07g2085 241 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Alju07g2085 241 CDD SANT 18 63 IPR001005 -
Alju07g2085 241 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Alju07g2085 241 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Alju07g2085 241 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 137 - -
Alju07g2085 241 SMART sant 15 65 IPR001005 -
Alju07g2085 241 SMART sant 68 116 IPR001005 -
Alju07g2085 241 MobiDBLite consensus disorder prediction 120 142 - -
Alju07g2085 241 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Alju07g2085 241 FunFam MYB-related transcription factor 15 68 - -
Alju07g2085 241 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2085 Alju-ChrAlju07 47058803 47059707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2085 1 167 MYB Transcription Factor Family AT4G38620 50.847 3.21e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g2085 Myb_DNA-binding 4.2e-14 CL0123