Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2084 ATGGGGAGGAGTCCATGTTGCTCCAAGGAAGAAGTGAACAGAGGAGCCTGGACTGCCCTTGAGGACAAGTTACTCATCTCGTACGTCCAAGCCCATGGCGAAGGCAAATGGCGAAACCTCCCCCACCGAGCTGGCCTGAAAAGATGTGGCAAAAGCTGCAGGCTTCGCTGGCTAAACTATCTCAGGCCTAACATTAAGCGAGGCAACATCACTCACGATGAAGAAGATCTCATTATCAGGCTCCATAAACTTCTTGGTAACAGATGGGCTCTTATAGCTGGAAGGCTTCCTGGGAGAACAGACAATGAAATCAAGAACTACTGGAACACGACTCTGGCTAAGAAGCTCCGACACTTGGAATCAACGACAGGCAAGCAAGTGGCAGATGATCCTCAGCCACAACCACAATTAATTCAAACCAAGCCCAGTCGGTGTAAGAACCTAGTTATCCTGCCGCCGCAACACCCACATGAAAACTTCAACATCAACTCTTGTGCTTCAAACCAGATACAGGTTGATGCAGCTCCGACAGCCACAAATCAATCTGTGCAGGGTTTACGTTCTCCGAAAACTCAAGTTAATGCAGACGAAGAGGGGGTTCATGAAAATCATTATTCGGGTGTGAACATTTGGGGTTCTGGGAGCGAGGATCAGTTTGGCCTGAGTGCAGAAAATTTGTACGGAGAAGCCGGGATCCTTAACCTCGACCAGCCCCTACCCGTTGACGAACTTATGGTCAATGGCTGGGTCCCGACAACAAGTGGCTTCGATGTCCCCGAGAATAATGTTGCTGTGGATTTGGAATCACTGTCCCTCCTGCTCGACTGTGGGGTTTGGCCCTGA 843 0.4982 MGRSPCCSKEEVNRGAWTALEDKLLISYVQAHGEGKWRNLPHRAGLKRCGKSCRLRWLNYLRPNIKRGNITHDEEDLIIRLHKLLGNRWALIAGRLPGRTDNEIKNYWNTTLAKKLRHLESTTGKQVADDPQPQPQLIQTKPSRCKNLVILPPQHPHENFNINSCASNQIQVDAAPTATNQSVQGLRSPKTQVNADEEGVHENHYSGVNIWGSGSEDQFGLSAENLYGEAGILNLDQPLPVDELMVNGWVPTTSGFDVPENNVAVDLESLSLLLDCGVWP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2084 280 CDD SANT 16 61 IPR001005 -
Alju07g2084 280 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju07g2084 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju07g2084 280 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju07g2084 280 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju07g2084 280 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju07g2084 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju07g2084 280 FunFam MYB-related transcription factor 13 66 - -
Alju07g2084 280 Gene3D - 70 137 - -
Alju07g2084 280 CDD SANT 71 112 IPR001005 -
Alju07g2084 280 SMART sant 66 114 IPR001005 -
Alju07g2084 280 SMART sant 13 63 IPR001005 -
Alju07g2084 280 Gene3D - 14 66 - -
Alju07g2084 280 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 181 - -
Alju07g2084 280 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2084 Alju-ChrAlju07 47049747 47050957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2084 1 116 MYB Transcription Factor Family AT2G16720 72.414 8.54e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g2084 Myb_DNA-binding 9e-15 CL0123