Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2083 ATGGGGAGATGTCCATGTCGCTCAGACAAAGGAGAAGGGCTGAAAAGAGGAGCATGGACTGATCAAGAAGACAAGTTACTCACTTGTTACATTATGGCCCACGGCGAAGGCAAATGGACCCACGTCCCTAAAGCGGCCGGCTTGAACAGGAGTGGCAAAAGCTGTAGACTCAGATGGATGAACTATCTCAGGCCTGACATTAAGCGAGGAAACATCACTCGCGATGAAGAAGATCTCATCATTAGGCTCCATAAACTTCTTGGCAACAGATGGTCTCTCATAGCTGGAAGGATACCAGGACGAACAGACAATGAAATAAAAAACTACTGGAACACAACTTTGTCGAAGAAGCTTAGAACACAATCATGTGTAACGGCGACTGAACGACATCAATCGAGCAATTCAACGGCAAGGAAGTCTTACGATAACCTGTCAGCAGTTATCCAAACAAAGCCTTGGAAATGCAAAAACGTGGTTATGCGACATCCTCCATGTCACCAGATAGAGTTTCAGGAAGATGACGTAACCACCCAGCTTTTCACTAATCAATCTCAAAACTCATCACCTCCTTCAGAGTCTCGAGTTAATGATGTCCATGACCATCATCAGTTTAATCAAAATGATAGCTTTGACGTGAATTTGTTGAGCCTTGGAAACAATAATCACTATGTAGCCATGGATGCTCCCAATGATCAGTGCCAGCCTATTGACCAAGTTATGTTCAGTGGTGCTTGGACCACGAGTTGCTTTGAGGTCGACATCGATAGTATTGGCTCTTATTGGGATATTGATTCATTGGCCCTCCTCCTGGAATCTGAGGTTTCGGACGTCAGTCCTGTGAATTCATGA 849 0.4476 MGRCPCRSDKGEGLKRGAWTDQEDKLLTCYIMAHGEGKWTHVPKAAGLNRSGKSCRLRWMNYLRPDIKRGNITRDEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEIKNYWNTTLSKKLRTQSCVTATERHQSSNSTARKSYDNLSAVIQTKPWKCKNVVMRHPPCHQIEFQEDDVTTQLFTNQSQNSSPPSESRVNDVHDHHQFNQNDSFDVNLLSLGNNNHYVAMDAPNDQCQPIDQVMFSGAWTTSCFEVDIDSIGSYWDIDSLALLLESEVSDVSPVNS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2083 282 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Alju07g2083 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Alju07g2083 282 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Alju07g2083 282 SMART sant 68 116 IPR001005 -
Alju07g2083 282 SMART sant 15 65 IPR001005 -
Alju07g2083 282 CDD SANT 73 114 IPR001005 -
Alju07g2083 282 Gene3D - 9 68 - -
Alju07g2083 282 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 194 - -
Alju07g2083 282 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Alju07g2083 282 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Alju07g2083 282 FunFam Transcription factor TT2 72 142 - -
Alju07g2083 282 Gene3D - 72 144 - -
Alju07g2083 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Alju07g2083 282 CDD SANT 18 63 IPR001005 -
Alju07g2083 282 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Alju07g2083 282 FunFam MYB-related transcription factor 15 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2083 Alju-ChrAlju07 47021721 47024201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2083 13 138 MYB Transcription Factor Family AT3G13540 65.079 1.70e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g2083 Myb_DNA-binding 3.2e-15 CL0123