Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2082 ATGAGGAGGAGTTCAAGTTGTCCTGGGGAAGTAGAAGGACTGAACAGAGGAGCATGGACTGCTCAAGAGGACAAGTTGCTCACTTCTTACATCATGCTCCACAGCGAAGGCAAGTGGAGCCAAGTCCCTATAAGAGCTGGCTTGAATAGGAGTGGCAAAAGCTGTAGGCTTCGATGGCTGAACTATCTCAGGCCTGATATTAAGAGAGGCAACATCACCCAAGACGAAGAAGACCTCATTATTAGACTTCATAGACTTCTTGGTAACAGATGGTCTCTTATAGCTGGAAGGCTACCTGGAAGAACAGACAATGAGATCAAGAACTACTGGAACACTACTTTGGGAAAGAAGCTTAGAACACAATCAGGCGTAACGACGTCGTCTCAACAACATGCGTCCCCCAAATCAATCGAGTCTGATGATATCACTGGACCAGTACAAGTGATCCAAACGAAGGCCGTCAGATGCAAAAACGTGGTTATCCAACATCCCCCACCTAACTGCCCTGAGGAAACGACGTCGCCCAACGTCAAATCTCTAGCTTCTTCCTACCAGTTAGGGTTTGACGAAGCCCACCTAGCTCCCCAGTTCACGAACCAGTCTCTGCAGGCCGATGTACATGAATATGTGAACTTGTCGGGACCTGAACGGAATGATGAGATTCATGGTGAACTGAATGGAATAGATTTTTTCAGAGAGTTTAACGTGGACAATAGCATGGCCATGGCCATGAATGCTCAAGCAGACGAGTTCTCACCTATCGACGAACTTATTATTGGCAAGTGTGGGACAGCTGATGGATTCAGGAACATTGGCTCTATGGATCTGGATTTAATGACATTCATGCTGGATTGGCCTTAA 861 0.4669 MRRSSSCPGEVEGLNRGAWTAQEDKLLTSYIMLHSEGKWSQVPIRAGLNRSGKSCRLRWLNYLRPDIKRGNITQDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKLRTQSGVTTSSQQHASPKSIESDDITGPVQVIQTKAVRCKNVVIQHPPPNCPEETTSPNVKSLASSYQLGFDEAHLAPQFTNQSLQADVHEYVNLSGPERNDEIHGELNGIDFFREFNVDNSMAMAMNAQADEFSPIDELIIGKCGTADGFRNIGSMDLDLMTFMLDWP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2082 286 MobiDBLite consensus disorder prediction 120 140 - -
Alju07g2082 286 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Alju07g2082 286 Gene3D - 16 68 - -
Alju07g2082 286 SMART sant 68 116 IPR001005 -
Alju07g2082 286 SMART sant 15 65 IPR001005 -
Alju07g2082 286 FunFam Myb transcription factor 16 68 - -
Alju07g2082 286 CDD SANT 73 114 IPR001005 -
Alju07g2082 286 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 162 - -
Alju07g2082 286 Gene3D - 71 141 - -
Alju07g2082 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 63 IPR017930 -
Alju07g2082 286 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Alju07g2082 286 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Alju07g2082 286 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Alju07g2082 286 CDD SANT 18 63 IPR001005 -
Alju07g2082 286 FunFam Transcription factor TT2 72 142 - -
Alju07g2082 286 MobiDBLite consensus disorder prediction 120 137 - -
Alju07g2082 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Alju07g2082 286 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2082 Alju-ChrAlju07 47012209 47013265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2082 13 149 MYB Transcription Factor Family AT3G13540 60.584 5.56e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g2082 Myb_DNA-binding 4.1e-13 CL0123