Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2073 ATGGGAGATCCCTGGTCTATTGTTCCGTACAATGATTACATTTACGATTTCCCATTTCCCGATGACTTCCTCGATTTCCAGAATGATCCTATTCCACCCCCTGATCCAGGTCCATCCAATGAGCACAAATCTCCATTGTTTCCACAACAACACAGTGGTCCCATTTTTGAGAGTAATGTTCCGGATTCGGGTCAAGCGATTCAAGACACCCCCATGGGCCATTTTCCCCATCAAGATTGCAACTTTGAAGCGGGTCATCAAGTGATTCAGGATACCCCAATGTGCCATATTCCTCATCAAGAGTGCAACTGTGAAGCGGGTCTAGCGAATCAAGATACCCCAATGTGCAATATTCCCCATCAAGAGTGCAACTTCGAAGCGGGTCCATCTCAAGTTCACGGGCAAAGCCATATTCCGAGTCAGGAGAATGTGCACACACAACAGGATTTCCCAGATGTGGCTCAAATTCCAAACTCGCCACAAAATCCACTCCCTTTTCTTTGTAGTTGTTGTCAAATTCTTAGAGAAATCATTCACACTAATGGGATTCAGTTAGCGAAATTGGAGATTCACGGAAGAGTGGGTGAAATCTGTCATGGAATTCTACGACAGAATATAAATGCGGGTTCCACCGGAGGTCACCAAAGTCACTTGCTTGATGTGACTGATATGAGTTTGAACCTTTTCGGAAATTCGATCATAATCAGTTTTAGCCAAATAAGTATGGAGGAGATCAAGAATTATATAAGGCAGTACTGCACGGAGAAAAATGCAGCAGGCTGCTACACTCTGTTAGATCCACTGTCAGCTTATTATGAAGCCCTCTGCGTTGGAATGGAATGGAATGAGGAGTTAAACGACGACTTCCTCGACAATGATAATAATTCTGGGGGTACATTTGATGAGGCCGATGATATGGATAGGACTACTAGGGCTAGTCTTTCAGCGCAGAGGGAGAGAGCGGGGAAGATGAAACTGAGCGATTTCAGCGATGTGTTTCATCTACCAATTGAAGAAGCAGCCAGGCTAGTGAACTTGTGTCCTACAGTTGTAAAGAAGATATGCCGTAAAGAAGGATTACCCAGATGGCCTCACAGAAAGTTAAAGAGTATAGTGAGGAAAGTAGGCATATTGAGAGGGATTTTAAACTCACCAGATCAGGAGGCTGCAGCAAGGGCTCGAGCGGAGGCAGAACTAGAGAGACTTCATCGAGAAATCATTCATCACTGTGGTGGAATCATGCCCACTTCATTAAATTTCAATGCTTGA 1269 0.4444 MGDPWSIVPYNDYIYDFPFPDDFLDFQNDPIPPPDPGPSNEHKSPLFPQQHSGPIFESNVPDSGQAIQDTPMGHFPHQDCNFEAGHQVIQDTPMCHIPHQECNCEAGLANQDTPMCNIPHQECNFEAGPSQVHGQSHIPSQENVHTQQDFPDVAQIPNSPQNPLPFLCSCCQILREIIHTNGIQLAKLEIHGRVGEICHGILRQNINAGSTGGHQSHLLDVTDMSLNLFGNSIIISFSQISMEEIKNYIRQYCTEKNAAGCYTLLDPLSAYYEALCVGMEWNEELNDDFLDNDNNSGGTFDEADDMDRTTRASLSAQRERAGKMKLSDFSDVFHLPIEEAARLVNLCPTVVKKICRKEGLPRWPHRKLKSIVRKVGILRGILNSPDQEAAARARAEAELERLHREIIHHCGGIMPTSLNFNA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2073 422 MobiDBLite consensus disorder prediction 43 66 - -
Alju07g2073 422 MobiDBLite consensus disorder prediction 24 74 - -
Alju07g2073 422 ProSiteProfiles RWP-RK domain profile. 311 391 IPR003035 -
Alju07g2073 422 PANTHER PROTEIN RKD4 138 406 IPR044607 GO:0003700
Alju07g2073 422 MobiDBLite consensus disorder prediction 27 41 - -
Alju07g2073 422 Pfam RWP-RK domain 324 371 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2073 Alju-ChrAlju07 46912662 46914448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2073 333 410 AtRKD Transcription Factor Family AT5G66990 35.443 6.68e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Alju07g2073 RWP-RK 4.4e-19 No_clan