Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2060 ATGTCAGTCCACCAGCCATTTGACGGCAGAGCTCTGCCTCTAAACACCACCGTGGTGGCCGTCGACAAAGGCAAGAACAGTGTATATGCCTTCCGGTGGGCACTCAATCATCTTGGTAGTGCAGTCTTCGTCGCTCTCCACGTTAGGTCGAAACAAATTCCACCCCATGAGGGCCTCAAGGTTTTTCCCCCAGACGAAAGCGATGTAGCCCATGTTTTCTCTGCATTACGAGAATTACGTCCACATAAGGCGGTGACGATAAAAGAAGCCGTAGTTGATGATAGTAATGTTGTCAAAGGAATTTCAGAATTTGCAAACAAGCATCACATCGGCAGTATCGTTATCGGCGCAACGGCTAGCTGGAATTCTCTGGCAAGGAAATTTATAGGTTTTGATTTGCCAACGGCCATAATCAAATCAGCTCCAGATTATACTTCTGTGTACATAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCCCTACGTCCTATGTCAAACATTTGTGCCCTGTCAAAACAACCGAAGGCACTTCAACCAAATGATGTAGAAAACGGAGTAAGGGAACGGGCAGCCAAAAGAGGAGGGATAACAGAGGGATCAGAAAGAATGTCTTCTGAGAGAAACAAGAATGGAGTAATGCACAAGAGTACTGACGATTCGTCGATGGATAAACTCGACCTGTCCAATCGTGGGTTGAAGGCATCGGTTAGCGTTGATTCTTTTTCGGACGAAAGTATTTCATCAGATCTAACTAAGCAAGATTTGGAGTTTAGCTTTTCATCTGATGGCTCCAGGACGTCATCATCTTCCCAGCCCTCAAAAGAATTAGAAGCTGAAATGAAGAGATTGAGGCTTGAACTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAGGAGGCAATCTCAGCAAAAAATAAGGCCAACGAGATTAATCAATGGAAACTAGAGGAGGCACGTAAACTTGAGGAAGCTATATTGTCAGGAGAGGCAGCTCTTGCACTAGCAGAAAAGGAGAAGGCTAGAGCCCGAGCTGCCCTAGAAGAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAGATATGCAGAGCTAAAGGCCAGGAAAGAGGCAGAAGAAAAGGACAGAGTATTAACTGCTTTGGCTAAAAATGATGTTCGATATAGAAAATACACTATAGAAGAGATCGAATGGGCTACTCAAAAGTTCTGCCCATCCTTGAAAATAGGTGAAGGTGGATATGGGCCTGTGTTTAAAGGTGAACTTGATCTCACCCCTGTTGCGATCAAAATATTAAGACCTGATGCTTCTCAAGGCAGAAAGCAGTTTCACCAAGAGGTTGAGGTATTATGCTGCATCAGACATCCTAATATGGTCCTCCTCCTTGGTGCCTGTCCTGAGTTTGGCTGTCTGGTTTATGAATACATGGATAATGGTAGCTTGGAGGATAGATTATTTCGGAAGAATAAAAGCCCACCTCTTTCATGGAGATTAAGGTTCACAATAGCTGCTGAAATTGCAACTGCACTTCTTTTCCTTCATCAAAGCAAACCAGAACCCCTTGTGCACCGGGACCTAAAACCAGCCAACATCCTCCTAGACCGGAATTATGTGAGTAAAATCAGTGATGTAGGCCTGGCACGATTGGTTCCGGCTTCTGTAGCTGATTCTGTCACACAATATTACATGACTTCAGCTGCTGGAACCTTTTGCTACATTGATCCTGAGTATCAACAAACAGGGAAGTTAACAACTAAATCAGATATATATTCACTAGGGGTAATGCTGCTACAAATTATCACAGCCAAGCCTCCCATGGGTCTTGCTCACCATGTGAAAAGGGCAATGGAAAGGGGAAAATTTGCAGAGATGCTTGATCCTACAGTGACTGATTGGCCAGTTGAAGAGGCTCTAGCATTTGCCAAAGTGGCAGTGAGTTGTGCCGAGCTTAGCAAGAAGGACAGGCCAGACCTTGCAACAGTTGTTGTGCCAGAGCTTAACCGCTTAAGGAATTTTGGTTGCACGTCTCACCCGAGTCCTATTGTCATCAACAGTCAGAGTCATAGTGGAGCGGGACACTCACCTAGTCCTAGACCTCCACGAAATTCATGA 2127 0.4504 MSVHQPFDGRALPLNTTVVAVDKGKNSVYAFRWALNHLGSAVFVALHVRSKQIPPHEGLKVFPPDESDVAHVFSALRELRPHKAVTIKEAVVDDSNVVKGISEFANKHHIGSIVIGATASWNSLARKFIGFDLPTAIIKSAPDYTSVYIISKGKIVSARSALRPMSNICALSKQPKALQPNDVENGVRERAAKRGGITEGSERMSSERNKNGVMHKSTDDSSMDKLDLSNRGLKASVSVDSFSDESISSDLTKQDLEFSFSSDGSRTSSSSQPSKELEAEMKRLRLELKQTMDMYSSACKEAISAKNKANEINQWKLEEARKLEEAILSGEAALALAEKEKARARAALEEAEEAKKMAEKEAERRRYAELKARKEAEEKDRVLTALAKNDVRYRKYTIEEIEWATQKFCPSLKIGEGGYGPVFKGELDLTPVAIKILRPDASQGRKQFHQEVEVLCCIRHPNMVLLLGACPEFGCLVYEYMDNGSLEDRLFRKNKSPPLSWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPASVADSVTQYYMTSAAGTFCYIDPEYQQTGKLTTKSDIYSLGVMLLQIITAKPPMGLAHHVKRAMERGKFAEMLDPTVTDWPVEEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFGCTSHPSPIVINSQSHSGAGHSPSPRPPRNS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2060 708 MobiDBLite consensus disorder prediction 685 708 - -
Alju07g2060 708 Pfam Universal stress protein family 18 130 IPR006016 -
Alju07g2060 708 Gene3D HUPs 15 149 IPR014729 -
Alju07g2060 708 MobiDBLite consensus disorder prediction 186 226 - -
Alju07g2060 708 SUPERFAMILY Protein kinase-like (PK-like) 392 667 IPR011009 -
Alju07g2060 708 Coils Coil 320 380 - -
Alju07g2060 708 FunFam U-box domain-containing protein 51 481 681 - -
Alju07g2060 708 Pfam Protein tyrosine and serine/threonine kinase 413 667 IPR001245 GO:0004672|GO:0006468
Alju07g2060 708 SMART serkin_6 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2060 708 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 380 480 - -
Alju07g2060 708 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 119 - -
Alju07g2060 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Alju07g2060 708 Coils Coil 274 294 - -
Alju07g2060 708 ProSiteProfiles Protein kinase domain profile. 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2060 708 MobiDBLite consensus disorder prediction 178 226 - -
Alju07g2060 708 Gene3D Phosphorylase Kinase; domain 1 375 480 - -
Alju07g2060 708 Gene3D Transferase(Phosphotransferase) domain 1 481 680 - -
Alju07g2060 708 PANTHER OS02G0152300 PROTEIN 18 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2060 Alju-ChrAlju07 46820714 46824117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2060 87 683 Receptor kinase-like Gene Family AT5G12000 60.650 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju07g2060 PK_Tyr_Ser-Thr 2.3e-39 CL0016