Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2056 ATGTTTGTGAGGGCCCAATTTCTACCGAATTTCTCAACCATCAGACCGACGAATTGTCAGGCATCAAAAGGCCCCGACCATTGGACGATACGACTCTCTCATATTTGCCCTCACCGGCGCCTTCCCTCTCTGCTACGTTGCCACCTTCCTCAACTCCTCCCAACTCCAGCCTTTGAAGATCTGAGGAGTTTGGGGAATCCTAACCTCGTAATCCACTCCCATAACTACTCTTTTATACTTGCTACTTATTCTACTCTCTCTGAAAGTTTTTTCTATTTGTGGTTATTACTTCTCCAAGAGTTTACAATCATGGCTGGCTTGGCACCAGAGGGGTCGCAATTTGATGCTCGTCAATTTGATACTAAGATGAATGAATTACTTGGAACTGAAGGACAGGACTTTTTTACTAGTTATGATGAAGTTTATGAAAGCTTTGATGCTATGGGATTGCAGGAGAACCTTCTGAGAGGCATTTATGCTTATGGTTTCGAGAAGCCCTCTGCAATTCAGCAAAGAGGGATTGTTCCTTTCTGCAAGGGTCTTGATGTGATTCAGCAGGCACAATCTGGAACCGGAAAAACTGCAACTTTTTGTTCTGGAATTTTGCAGCAGCTTGATTACAGCTTAGTTGAATGCCAAGCACTGGTTCTTGCTCCTACTCGTGAACTTGCACAACAAATTGAGAAGGTCATGCGAGCACTGGGTGACTATCTTGGTGTCAAGGTTCATGCTTGTGTGGGTGGCACCAGTGTCCGGGAAGACCAACGTATCCTCTCAAGTGGGGTGCATGTTGTTGTCGGTACCCCTGGTCGTGTGTTTGACATGCTTCGGAGGCAATCTCTCCGCCCTGATTACATTCGAATGTTTGTGTTGGATGAGGCAGATGAGATGCTTTCTCGGGGTTTCAAGGATCAGATCTATGATATTTTCCAGCTGCTGCCACCAAAAATTCAGGTTGGGGTTTTCTCCGCTACCATGCCTCCTGAGGCTCTTGAGATTACAAGGAAGTTCATGAATAAACCTGTGAGGATCTTGGTGAAGCGTGATGAGCTTACCTTGGAAGGGATCAAACAATTTTACGTCAATGTTGAGAGGGAGGAATGGAAGCTGGAGACACTTTGTGATCTTTATGAGACATTGGCAATAACCCAGAGTGTTATCTTTGTGAACACCAGGCGCAAGGTGGACTGGCTTACAGACAAGATGCGCAGCCGTGATCACACTGTTTCTGCAACCCATGGAGATATGGACCAAAACACAAGGGATATCATCATGAGGGAATTCCGTTCTGGTTCTTCCCGCGTCTTAATCACCACAGATTTATTAGCCCGTGGTATTGATGTCCAGCAAGTTTCCCTTGTGATTAATTACGATCTTCCAACCCAGCCAGAGAACTACCTGCATCGAATTGGTCGTAGTGGTCGGTTTGGGAGGAAGGGTGTTGCTATTAATTTTGTGACCAAGGACGATGATAGGATGCTGTTTGACATTCAAAAGTTCTATAATGTGGTGATTGAAGAACTGCCAGCCAATGTTGCTGATCTACTTTGA 1551 0.4539 MFVRAQFLPNFSTIRPTNCQASKGPDHWTIRLSHICPHRRLPSLLRCHLPQLLPTPAFEDLRSLGNPNLVIHSHNYSFILATYSTLSESFFYLWLLLLQEFTIMAGLAPEGSQFDARQFDTKMNELLGTEGQDFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEREEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDDRMLFDIQKFYNVVIEELPANVADLL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2056 516 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 290 298 IPR000629 -
Alju07g2056 516 CDD DEADc_EIF4A 147 345 - -
Alju07g2056 516 Gene3D - 352 516 IPR027417 -
Alju07g2056 516 SMART helicmild6 396 477 IPR001650 -
Alju07g2056 516 FunFam Eukaryotic initiation factor 4A-III 351 516 - -
Alju07g2056 516 SMART ultradead3 162 359 IPR014001 -
Alju07g2056 516 FunFam Eukaryotic initiation factor 4A-II 131 350 - -
Alju07g2056 516 PANTHER RNA HELICASE 129 500 - -
Alju07g2056 516 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 355 516 IPR001650 -
Alju07g2056 516 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 143 171 IPR014014 GO:0003724
Alju07g2056 516 Pfam Helicase conserved C-terminal domain 369 477 IPR001650 -
Alju07g2056 516 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 174 344 IPR014001 -
Alju07g2056 516 Pfam DEAD/DEAH box helicase 168 329 IPR011545 GO:0003676|GO:0005524
Alju07g2056 516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 497 IPR027417 -
Alju07g2056 516 Gene3D - 133 351 IPR027417 -
Alju07g2056 516 CDD SF2_C_DEAD 356 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2056 Alju-ChrAlju07 46787094 46792959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2056 104 516 Eukaryotic Initiation Factors Gene Family AT1G72730 89.130 0.0 771