Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2045 ATGATAAAAGGCTTGGTGGCGGATGAGAATATGTCGAATTTGACATGTGCATCTAGTGAAATAAGCGCTTCTTCTGGGACCAGAAATGATACTCCTGTCTCTCTCTATCCGCACAACCAGTACTCCTCCACTTCAGCAATTCAAGAACCTCAACCCAAAAAGAAGAGAAACCTTCCGGGCAATCCAGACCCAGAGTCTGAAGTAGTAGCCTTGTCTCCAAAGACCCTCTTGGCAACAAACCGATTCTTCTGTGAGGTATGCAACAAAGGGTTTCAGAGAGACCAAAATCTGCAGCTTCACAGAAGAGGGCACAACTTGCCATGGAAGCTGAAGCAAAGAAACAAACAAGAATTGATTAAGAAGAAGGTGTATGTTTGCCCGGAGGTGACGTGTGTTCACCATGACCCCTCAAGGGCCCTCGGAGACCTCACCGGCATCAAGAAGCACTTCTGCAGGAAGCACGGCGAGAAAAAATGGAAGTGTGAAAAATGCTCCAAACGTTACGCTGTTCAGTCTGACTGGAAGGCTCACTCTAAAATTTGTGGCACCAAGGAGTACAAATGTGATTGCGGAACCATCTTCTCTAGAAGGGACAGTTTCATAACACACAGAGCCTTCTGTGATGCTTTAGCACAGGAGAGTGTAAGAGCAATCACAGCAGTGAACCCTCTTCTTCATAGCCATCCCCTCCAAGCTCCACCTCCATTATTACTCTCCAAGAAACAACAAGATAACTTTCCACCATGGCTGGGAGGAGAATCTACCGCAACTACTGGAGGAAACACTCTCATCAGGCCTTTAATCTTATCCTCAAATCTAGACCAGCCCTTAACTGGAGGAAACAGTCTCATCAGGCCTTTAATCTCATCCTCAAATCTAGACCAGTCCTTAAACTTAATCCACCAAAACCCTAATAATAACCCCACAAAACCGTCCCTTCCTCGTTTCCAATCCTCAGCCTCATCTCCTTACATGTCAGCCACTGCTTTGTTGCAGAAAGCATCACAAATAGGTCACATGCCTCAATCTGATCCTCAATGTACCACCATTATGCCTAATTCATCCTCTTCTTCAGCTGTTTCTGGTTTGGGTGTGCCTTCACGTGACGACCAGATATTAATGGGGTTGCCTCATGCCTTGGCTTCTTATGGGAATAAAGCTGCTGATGGTTTTGTTGCCTCTGATAATTACTTAGAAGATGGTGCAACTCCACCTAATAATACTACTTCTCTTTTCCATGACATGATGGTTAATAATAAAAATACTGCTTCTTCTGCTAATAATAATGCCTTTGATGAGAGGTCGTCTTCTTCCTTCGAGGATGCTTTGAGAGGAATGTTGCATAATCCAACAAGAGATCACACTACTGCAGCTGCTAGCAATGAAATGACCAGAGATTTTCTGGGTCTCAAGGCATTTTCTCAGAAAGATTTTTTCAACATATCGGGGCTTGACCATTTGGGTTCTTCGACGTCGTATGGTAAGCAAAGTCGCAACCAAACACCTTGGCAAGGCTAA 1518 0.446 MIKGLVADENMSNLTCASSEISASSGTRNDTPVSLYPHNQYSSTSAIQEPQPKKKRNLPGNPDPESEVVALSPKTLLATNRFFCEVCNKGFQRDQNLQLHRRGHNLPWKLKQRNKQELIKKKVYVCPEVTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKEYKCDCGTIFSRRDSFITHRAFCDALAQESVRAITAVNPLLHSHPLQAPPPLLLSKKQQDNFPPWLGGESTATTGGNTLIRPLILSSNLDQPLTGGNSLIRPLISSSNLDQSLNLIHQNPNNNPTKPSLPRFQSSASSPYMSATALLQKASQIGHMPQSDPQCTTIMPNSSSSSAVSGLGVPSRDDQILMGLPHALASYGNKAADGFVASDNYLEDGATPPNNTTSLFHDMMVNNKNTASSANNNAFDERSSSSFEDALRGMLHNPTRDHTTAAASNEMTRDFLGLKAFSQKDFFNISGLDHLGSSTSYGKQSRNQTPWQG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2045 505 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 39 476 IPR031140 -
Alju07g2045 505 MobiDBLite consensus disorder prediction 19 51 - -
Alju07g2045 505 MobiDBLite consensus disorder prediction 19 66 - -
Alju07g2045 505 MobiDBLite consensus disorder prediction 336 365 - -
Alju07g2045 505 MobiDBLite consensus disorder prediction 485 505 - -
Alju07g2045 505 SMART c2h2final6 82 104 IPR013087 -
Alju07g2045 505 SMART c2h2final6 159 179 IPR013087 -
Alju07g2045 505 SMART c2h2final6 124 154 IPR013087 -
Alju07g2045 505 MobiDBLite consensus disorder prediction 298 320 - -
Alju07g2045 505 MobiDBLite consensus disorder prediction 336 364 - -
Alju07g2045 505 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Alju07g2045 505 FunFam protein indeterminate-domain 5, chloroplastic-like 137 216 - -
Alju07g2045 505 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 104 IPR013087 -
Alju07g2045 505 SUPERFAMILY beta-beta-alpha zinc fingers 81 179 IPR036236 -
Alju07g2045 505 Gene3D Classic Zinc Finger 137 216 - -
Alju07g2045 505 FunFam protein indeterminate-domain 12-like 61 130 - -
Alju07g2045 505 Pfam Zinc-finger double-stranded RNA-binding 82 104 IPR022755 -
Alju07g2045 505 Gene3D Classic Zinc Finger 60 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2045 Alju-ChrAlju07 46709236 46711407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2045 8 345 IDZ Gene Family AT1G55110 52.717 4.97e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju07g2045 zf-C2H2_jaz 3.2e-05 CL0361