Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2039 ATGACTCCTGTTGCTATGAACCCTCCAAACCCTTTCCTTCTCACCGATCAAATAGAAGATCAACACCAACACTTCGTTTCTCCTCTTAATCAGGATTCTTCATCTAATTCTTCTCTCTCATCACGTCCTACTTTCTTCCACTTACTTGATCAAACTCAGACTGCTAGAGAAACCCACCGAGAGTTAAGACATGATCAAGAGGAAGATGGACTGGTGTTTCATGGTGGATCAAGCAGTCATCACCTAGTTTGTAATTCATCCTTCAATTCACCCCACCAGACTCAACAAGTTAAGGATGATCGAAGAAACGTGTGTGGCGGATATAAAGTAGAGGAGGAAGAAAGCCATAAAAGCAGTTACGAGACTGTACAATGGATGCCTTCAAAGATGAGGTTGATGAAGAAGATGATGATCCCAAATAATACTAGTCCTATCCCTCACAAAGGATCAAATACCACTCCAAATATCCAAACTCGAGAGCACCACAAAATCCAAACCCAAAAAAGCCCTTCCAATAACCACAGAAATAACACCACCACTAGGGTTTGCGCCGACTGTAACACAACCAGTACCCCACTTTGGAGGGGTGGCCCAAAGGGTCCTAAGTCACTGTGCAATGCGTGTGGGATTAGGCAGAGGAAGGCGAGAAGGGCATTAATGGCGGGAGCTGGAAATGGTGCAGTGAGTTGCAGATTGAATAGCAAGGAGAAGAAGGCTCGCACGAACCATTTTGTAGCATTAAAGAATAATGATAAGTGCAAGGACACTATTGCAAGAAGTAGTGAAGGAACATTGTCTGAGGAGGGAGAAAGGAACAAGAAGAAGAATATTGGGTTTAAGGGTTTGGCATTTAGTTTCAGGAACAACATGTCGGTGGTTGAGCAAGTGTTTCCTCCGGCCGATGAAGTTGCTCAAGCGGCGTTGCTTCTCATGGATTTATCTTATGCCTCTGTTCCTATTTAA 963 0.4393 MTPVAMNPPNPFLLTDQIEDQHQHFVSPLNQDSSSNSSLSSRPTFFHLLDQTQTARETHRELRHDQEEDGLVFHGGSSSHHLVCNSSFNSPHQTQQVKDDRRNVCGGYKVEEEESHKSSYETVQWMPSKMRLMKKMMIPNNTSPIPHKGSNTTPNIQTREHHKIQTQKSPSNNHRNNTTTRVCADCNTTSTPLWRGGPKGPKSLCNACGIRQRKARRALMAGAGNGAVSCRLNSKEKKARTNHFVALKNNDKCKDTIARSSEGTLSEEGERNKKKNIGFKGLAFSFRNNMSVVEQVFPPADEVAQAALLLMDLSYASVPI 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2039 320 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 176 221 - -
Alju07g2039 320 Gene3D - 177 276 IPR013088 GO:0006355|GO:0008270
Alju07g2039 320 ProSiteProfiles GATA-type zinc finger domain profile. 177 213 IPR000679 GO:0006355|GO:0043565
Alju07g2039 320 CDD ZnF_GATA 182 214 IPR000679 GO:0006355|GO:0043565
Alju07g2039 320 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 316 - -
Alju07g2039 320 SMART GATA_3 177 229 IPR000679 GO:0006355|GO:0043565
Alju07g2039 320 Pfam GATA zinc finger 183 216 IPR000679 GO:0006355|GO:0043565
Alju07g2039 320 ProSitePatterns GATA-type zinc finger domain. 183 208 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2039 Alju-ChrAlju07 46634144 46635789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2039 122 318 C2C2-Gata Transcription Factor Family AT4G26150 39.450 6.48e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju07g2039 GATA 7.1e-16 CL0167