Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2030 ATGGGAAGGAAATGCTCGTATTGTGGAAACCTTGGACACAATTCAAGGACTTGTAATATTATTGAGAGAGGTGCATTTGATAATGGTGGCCTCAAGATCTTTGGAGTGCAATTCATTGATCCTTCACCTCCTCCTCCTTCACCTACTAATCACAGTCATGACATCCAAAGGAGTTTCAGCTTCGACTGCTTATTGCCCTCTCCCCAGAACACCCTCATATCATCAACCACATCTTCCTCTTCCTCTTACGACAATTCACATCACAAAACGTCTGATTCTTATTTAGCCCCAAGAACCCAAGACAGGAATAATAAAGGAGTGGCATGGACGGAGGAGGAGCACCAGACATTTCTGATGGGGCTGAAGAAGCTGGGGAAGGGTGATTGGAGAGGCATCTCTAAGAATTATGTGAACACAAGAACACCAACCCAAGTGGCCAGTCATGCCCAGAAATATTTCCTCCGTCAGAATCATCACGCCAATAAAAGAAAGCGTTATCAAACCCTCCTTCACGATGTGGAGGGACAACATAATTACTCAGTCGAACCAGTAAAAAATTATTCTTGCTTTTATAAGCCCACTACTTCTGAAGCTGTTGGTGCTTCTGAGACTATGAACATGGATGTCCATTGCAGCAACCACACCAATGGCAAAAGGATTTGTCTCTCTCGGTGGTTTTCAAGTTATCATTCAATGCTTAATTGGTCTGCCTCTTCACCAAAGTGCGCTCTTAACTGCTTAGAACCTGATTTAGAACTCAAACTGGCGGCTCCGGGCTTTCTTTAA 786 0.4389 MGRKCSYCGNLGHNSRTCNIIERGAFDNGGLKIFGVQFIDPSPPPPSPTNHSHDIQRSFSFDCLLPSPQNTLISSTTSSSSSYDNSHHKTSDSYLAPRTQDRNNKGVAWTEEEHQTFLMGLKKLGKGDWRGISKNYVNTRTPTQVASHAQKYFLRQNHHANKRKRYQTLLHDVEGQHNYSVEPVKNYSCFYKPTTSEAVGASETMNMDVHCSNHTNGKRICLSRWFSSYHSMLNWSASSPKCALNCLEPDLELKLAAPGFL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2030 261 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 156 IPR006447 GO:0003677
Alju07g2030 261 PANTHER TRANSCRIPTION FACTOR KUA1 3 195 - -
Alju07g2030 261 MobiDBLite consensus disorder prediction 73 103 - -
Alju07g2030 261 FunFam transcription factor MYB1R1 107 158 - -
Alju07g2030 261 SUPERFAMILY Homeodomain-like 104 158 IPR009057 -
Alju07g2030 261 Pfam Myb-like DNA-binding domain 108 153 IPR001005 -
Alju07g2030 261 ProSiteProfiles Myb-like domain profile. 101 153 IPR001005 -
Alju07g2030 261 CDD SANT 108 153 IPR001005 -
Alju07g2030 261 Gene3D - 107 158 - -
Alju07g2030 261 SMART sant 105 155 IPR001005 -
Alju07g2030 261 ProSiteProfiles SANT domain profile. 109 157 IPR017884 -
Alju07g2030 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 157 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2030 Alju-ChrAlju07 46570554 46571556 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju07g2030 Myb_DNA-binding 9.2e-13 CL0123