Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2028 ATGGAGAATGATATGTTTGGTGCTCCAGTGGACGTGGCTGCGGGCCGAAATTCCTGTGTCTTATATGAAATTTCACAAACAGCAAATCCACTTGTTCAGGGCTATTCATTTGACCAAACACGCATCATGAATGGAATCTCAATGCTTGCTGGAATGCAAGGTGAACTCGTAAGTAATGTCCATTTCGATGTTTGTCCAATGAATCCTGCCTGCGTTGCCGATCCTAGTTCCTTGGTTCCATCTCAAGTAAAGAACATTTTAGGAGATGCCCCACTTGGAACCCCATGTCCCCGAATCAATGGTGTGTTTCAAGATCAACAAGCAGGAGCCAGTACAATCACTCCTGCTTCACTTTCTGTCATTTCTGCTGCAAGATGTGGTCTTCAAGAAAACTTGGAGAAATCATCAGCTTTGTCTCCTTCACTCTGTTCATTGGAGGCTCTGGCACCTAATATATTAAGCAATTGGCAGGATAGTTCAAACATATTGCTTCCAACTTTTGGAGATTGTGTGTATGATGAACTACCTGGTACTAGGTTCTTGGCTTTTTCGTCCACATCAAACCTGGATCCAAATGGATGGACATCTTCAAATGCTGCAAACTTGACCCATCATGGTTATGATTACCCGAATTTCAGAAATGAGCTTTCATTAAGTCTAGCAACATCTCCCACCACAGCTCAGTACTCGGACGTGAGTTCTGATAGCTTGGAACAAGCCTCCTGTAACAGTAGGGGAGTTTCTGGAAGTTTGGGTTCCAATAGACATTTCAATTTTTCACAAGAAATATTGGGGTCAAGATATCTTACTGGGATTCAAGAAATACTTGCTCAAATTGCAAGGTATTCACTTAAAAATACAGAACAGGTTAATTGTTCAGCTGCTAGTAGTAGAGCCAGAGCAGAAGGGAATATATCAACCTCAGTTTTTCCATCCGGGAGAATGATAGAGACAACAAATCACAATGCAGATTCTATGTTTGAAGCTCAAGTGAATTCTTCATTTCCTACACATGATGCTTCTGAATCAAAGAAATCCCAACTTCTGACAATTCTTCAACTGGTGGACAGTCGATATAATCAGTGTTTGGATGAGATACATACTGTTGTGTCCGCATTTCATGCTGCTTCAGAGTTGGACCCGCAAGTTCATGCACATTTTGCCCTTAAGACAATCTCTATGCTGTACAAGGATTTGCGTGAGAGGATAAGCAATTATATCCTTTCCATGGGAGAAATATTTAACAACTCACGCTCAGAAGAAGATAAGGAAAGGTCTACGGAAGCCTTATTCATCGAAAAACAATGGGCTCTGCAGCAATTCAAGAGAAAAGAGCATCAGTTATGGAGGCCCCAAAGGGGCTTGCCTGAACGATCTGTTTCTGTTCTTCGGGGTTGGATGTTTCAGAATTTCCTCCATCCGTATCCAAAAGATGCAGAGAAGCAACTACTTGCAGTAAAAAGTGGATTGACTAGAAGCCAGGTATCAAACTGGTTCATTAATGCTCGTGTAAGGCTGTGGAAACCTTTGATTGAGGAAATGTACGCTGAAATGAACAGAAAAAAGGCTCTTAGGAATGAAGAAGGCGCGCAGACCAGCCACAGAAGCAGCGGAGTACTCTTGAGCAATCAAAGATTTGCTGTCAATTCATAA 1653 0.4198 MENDMFGAPVDVAAGRNSCVLYEISQTANPLVQGYSFDQTRIMNGISMLAGMQGELVSNVHFDVCPMNPACVADPSSLVPSQVKNILGDAPLGTPCPRINGVFQDQQAGASTITPASLSVISAARCGLQENLEKSSALSPSLCSLEALAPNILSNWQDSSNILLPTFGDCVYDELPGTRFLAFSSTSNLDPNGWTSSNAANLTHHGYDYPNFRNELSLSLATSPTTAQYSDVSSDSLEQASCNSRGVSGSLGSNRHFNFSQEILGSRYLTGIQEILAQIARYSLKNTEQVNCSAASSRARAEGNISTSVFPSGRMIETTNHNADSMFEAQVNSSFPTHDASESKKSQLLTILQLVDSRYNQCLDEIHTVVSAFHAASELDPQVHAHFALKTISMLYKDLRERISNYILSMGEIFNNSRSEEDKERSTEALFIEKQWALQQFKRKEHQLWRPQRGLPERSVSVLRGWMFQNFLHPYPKDAEKQLLAVKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNRKKALRNEEGAQTSHRSSGVLLSNQRFAVNS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2028 550 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 203 529 - -
Alju07g2028 550 ProSiteProfiles 'Homeobox' domain profile. 468 509 IPR001356 GO:0003677
Alju07g2028 550 SMART prehox3 257 405 IPR006563 -
Alju07g2028 550 Pfam Homeobox KN domain 466 505 IPR008422 GO:0003677|GO:0006355
Alju07g2028 550 SUPERFAMILY Homeodomain-like 451 517 IPR009057 -
Alju07g2028 550 CDD homeodomain 449 509 IPR001356 GO:0003677
Alju07g2028 550 Gene3D - 443 523 - -
Alju07g2028 550 SMART HOX_1 449 513 IPR001356 GO:0003677
Alju07g2028 550 Pfam Associated with HOX 263 404 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2028 Alju-ChrAlju07 46545200 46547133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2028 214 522 Homeobox Transcription Factor Family AT4G32980 53.994 7.08e-103 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Alju07g2028 POX 4.5e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2028 07 46545200 46547133 Alju07g2028 07 46545200 46547133 ECH