Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2014 ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAGCGTTAAGAGAGGCCCTTGGTCTCCTGAAGAAGACGATACTCTCAGGACTTATGTTCAAACTCATGGCACCGGTGGTAATTGGATTGCATTGCCCCGTAAAGCAGGCCTTCGGAGGTGTGGCAAGAGTTGCCGTCTACGGTGGCTGAATTATCTCAGGCCAGACATCAAACATGGAGGCTTTACTGAAGAAGAAGACAACATCATTTTGAGCCTTTACGGCCAAATGGGAAGCAGATGGTCGGCCATAGCCTCTCGGCTTCCTGGTAGAACAGACAATGATGTGAAGAACTACTGGAACACCAAGTTAAAGAAGAAGCTAATGTCAGGAAAAGTGAACCTCAAAACAGTGTCCGACTACACACACACTACGACCACTCTTCCTTCGACCACATCACCACTAACTCATAATCCTCAAACCCAAAACCAAAATCCAGATTTTTCTGCTTCCCTAATAAACCACACTTCATCTTCCTCACCAACTCTGCGAATTCCGACGGACGCTAATTCTGGGGGGTTTCACCACCACATTAACACTCACAACACCATGATCAGTTTTGACCCGTCTCAATTATACAGTCCAGGGTTCATGGATGTCTCAGAAATCAACGCAAGCTCAAGCATGATGTCGTCCTTGTCTCAGGAAGGTTCAAGCATTTCGGATTCATCTTTTATGGCAACAGAGAACAAATTATGTGTGTCGCTGCCGGATCATGCTGGGGACGAAGCAACCCAAGTGTTGATGAATTTTGGGTTTGGTGGTTATCACTCTGACCTTGTCAATAATGGCTTTTACTCCCATGAGAAAATTGGCGAGTTCGCTTCAAGTTTCTATCCTCATGAGTTGGTTGATTTTGGCTATAATGCTGACATGAAGCCACAAGGACGAAATTAA 924 0.4567 MGRAPCCDKASVKRGPWSPEEDDTLRTYVQTHGTGGNWIALPRKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDNIILSLYGQMGSRWSAIASRLPGRTDNDVKNYWNTKLKKKLMSGKVNLKTVSDYTHTTTTLPSTTSPLTHNPQTQNQNPDFSASLINHTSSSSPTLRIPTDANSGGFHHHINTHNTMISFDPSQLYSPGFMDVSEINASSSMMSSLSQEGSSISDSSFMATENKLCVSLPDHAGDEATQVLMNFGFGGYHSDLVNNGFYSHEKIGEFASSFYPHELVDFGYNADMKPQGRN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2014 307 MobiDBLite consensus disorder prediction 134 180 - -
Alju07g2014 307 FunFam Transcription factor RAX3 7 68 - -
Alju07g2014 307 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Alju07g2014 307 CDD SANT 71 113 IPR001005 -
Alju07g2014 307 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Alju07g2014 307 Gene3D - 70 136 - -
Alju07g2014 307 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Alju07g2014 307 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Alju07g2014 307 CDD SANT 16 62 IPR001005 -
Alju07g2014 307 Gene3D - 7 68 - -
Alju07g2014 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Alju07g2014 307 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Alju07g2014 307 PANTHER OS09G0431300 PROTEIN 1 231 - -
Alju07g2014 307 SMART sant 67 115 IPR001005 -
Alju07g2014 307 SMART sant 13 64 IPR001005 -
Alju07g2014 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2014 Alju-ChrAlju07 46428324 46429810 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2014 1 134 MYB Transcription Factor Family AT5G57620 71.642 4.22e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g2014 Myb_DNA-binding 1.3e-13 CL0123