Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1994 ATGAAGTCCATGAATGATAGCAGGAACAACAACAACGATGGGAGTGGGGATGATAATAGTAGTAATCAAAACTGGTTGGGGTTTTCTCTGTCACCCCACATGAAAATGGAACTAACTTCTGGTCCTCCCCTCCATCACCACGATCACCATCAACCTCAGGCTTCAACTGCCGCCGTTTCTAGCTCCGTTCCGGCAACCTTCTGTTTGTCGCCTTCTCAGCTCAGCACTTACGGAATATGTTATGGTGCGGCGGAGAACACAGGCTTTCATTCTCCTTTGACCGTCATGCCTCTCAAGTCCGACGGCTCACTCTGCATAATGGAAGCTCTCACTAGATCACAATCTCCTCAAGTGATGATGCCGAATTCGTCTCCGAAACTGGAGGACTTTCTTGGTGGTGCAACTATGGGGACTCACGATGCAATGTCTTTGAGCCTCGACAGCATCTACTATGGCACTCAGAACGCACATCCTCAAGCCCCCAGAGACCATTCTCTTGACTTTCTTTCAGAGCCTTTCAGACACCACCAAGGCCCCATTTCTGTGCACTCACATCATCCTTATTATTCTGGAATTGCTTGCCATTCCTCTATTTATTCATCACCATTGGAGCATCAAAGCAAAGACCCCCAGATGCAACCACCAATGTCGTCCGATGAAGGTATCGCTTGTCTGAGAAACTGGGTGGCTCCCGGCAGGGACTATCCTGTTCAACATCAGAAGAAGAATGGAAGCACGGAGGATGACGGTGGTGGTGGAGCTTCTGGGTCAGTTGGTAAAGTTGGGTGCGGGGATTTTCAGTCTCTTGGCTTATCTGTGAGCCCGGGTTCACAATCTAGCTGTGTAACTGCGCCACAGCAGATTTCACCCTCTGCCACTGACGTGGTTGCAATGGAAGTCAAGAAGAGAGGGCCTGGAAAATTGGGCCACAAACAGCCTGTGCATAGGAAATCGATCGACACTTTTGGACAAAGAACGTCTCAGTTCCGAGGCGTCACAAGGCACAGATGGACTGGTAGATATGAAGCGCATTTATGGGATAACAGTTGTAAGAAGGAAGGGCAGACGAGGAAAGGAAGACAAGTTTATTTGGGGGGCTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTCAAGTACTGGGGACCCTCAACCCACATTAACTTTCCGTTGGAAAATTACCAGGTGGAACTTGAAGAGATGAAGAACATGAGCAGGCAAGAGTACGTTGCCCACTTGAGAAGAAAAAGCAGTGGTTTTTCCAGAGGGGCTTCAATGTATAGAGGAGTGACGAGGCATCATCAACATGGAAGATGGCAAGCAAGGATTGGTAGAGTTGCAGGAAACAAGGACCTTTATCTTGGAACATTCAGCACTCAGGAGGAAGCAGCAGAAGCATATGACATAGCTGCAATCAAGTTCAGAGGTGTGAACGCAGTTACCAACTTTGACATATCTAGGTACGATGTGGAAAGGATCATGGCCAGCAATACCCTCCTGGCCGGCGAGCTGGCTCGACGAAACAAAGACGCCGAGCCGAGGATGGCCATTGAGTACAATGTGACATCGAACCAGAGCAATGGGGAAGCGGTTCAAGCCCAAAGGAACAACAACAACAACGAGAACAACGGTTCAGAGTGGAAGATGTTGTATTCTCCAAATAGCTGTGAGCAGAAAACCGTGAACTGCGGAAATTACAGGAATACAGCCATATCTGTGGCCCTACAGGATCTCATTGGGATTGATTCGGCCGGCTCGGGTCATCAGGCCATGCTGGAGGACACTACAAAGATAGGCACTCGTTTTTCAAACCCATCCTCATTGGTCACGAGCCTAAGCAGCTCAAGAGAGGGAAGCCCGGATAAAACTGGTCCCACCATTTTGTTTCCAAAGCCTCCTCCAATAGCATCAAAGATTGTTAGTCCCGTAGGTAGTGGGGTTAGTTCATGGTTCCCTTCAGCAGCATCTCAGAGTTTGAGGCCAGCTTCAATGGCTCACTTGCCAGTTTTTGCCGCTTGGAACGATAGTTAG 2043 0.4885 MKSMNDSRNNNNDGSGDDNSSNQNWLGFSLSPHMKMELTSGPPLHHHDHHQPQASTAAVSSSVPATFCLSPSQLSTYGICYGAAENTGFHSPLTVMPLKSDGSLCIMEALTRSQSPQVMMPNSSPKLEDFLGGATMGTHDAMSLSLDSIYYGTQNAHPQAPRDHSLDFLSEPFRHHQGPISVHSHHPYYSGIACHSSIYSSPLEHQSKDPQMQPPMSSDEGIACLRNWVAPGRDYPVQHQKKNGSTEDDGGGGASGSVGKVGCGDFQSLGLSVSPGSQSSCVTAPQQISPSATDVVAMEVKKRGPGKLGHKQPVHRKSIDTFGQRTSQFRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQVELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDAEPRMAIEYNVTSNQSNGEAVQAQRNNNNNENNGSEWKMLYSPNSCEQKTVNCGNYRNTAISVALQDLIGIDSAGSGHQAMLEDTTKIGTRFSNPSSLVTSLSSSREGSPDKTGPTILFPKPPPIASKIVSPVGSGVSSWFPSAASQSLRPASMAHLPVFAAWNDS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1994 680 ProSiteProfiles AP2/ERF domain profile. 328 394 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 117 562 - -
Alju07g1994 680 CDD AP2 429 490 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 ProSiteProfiles AP2/ERF domain profile. 430 488 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 MobiDBLite consensus disorder prediction 1 29 - -
Alju07g1994 680 FunFam AP2-like ethylene-responsive transcription factor ANT 327 396 - -
Alju07g1994 680 CDD AP2 327 394 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 MobiDBLite consensus disorder prediction 234 258 - -
Alju07g1994 680 MobiDBLite consensus disorder prediction 612 634 - -
Alju07g1994 680 SUPERFAMILY DNA-binding domain 327 396 IPR016177 GO:0003677
Alju07g1994 680 Pfam AP2 domain 328 386 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 Pfam AP2 domain 431 480 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 FunFam AP2-like ethylene-responsive transcription factor 429 490 - -
Alju07g1994 680 MobiDBLite consensus disorder prediction 530 549 - -
Alju07g1994 680 SUPERFAMILY DNA-binding domain 429 490 IPR016177 GO:0003677
Alju07g1994 680 SMART rav1_2 430 494 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 SMART rav1_2 328 400 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 PRINTS Ethylene responsive element binding protein signature 470 490 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 PRINTS Ethylene responsive element binding protein signature 329 340 IPR001471 GO:0003700|GO:0006355
Alju07g1994 680 MobiDBLite consensus disorder prediction 1 57 - -
Alju07g1994 680 Gene3D AP2/ERF domain 327 396 IPR036955 GO:0003700|GO:0006355
Alju07g1994 680 Gene3D AP2/ERF domain 430 490 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1994 Alju-ChrAlju07 46204852 46208143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1994 210 510 AP2-EREBP Transcription Factor Family AT1G72570 59.807 5.94e-123 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju07g1994 AP2 2.9e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1994 07 46204852 46208143 Alju07g1994 07 46204852 46208143 ECH