Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1971 ATGTTGTGTGCTTGTTCCGGGGAGCAATTCAAATTCGAAGAGCCGCCACACTCGCCGGAGTCCCTCGCAACTAGAGATTTCTCGGCCAGTGGACTCTCTTCGAGGACTGGGGATTGGGAATCTAAATTTGATGATACGCAAGTAGATGAAGCTGAATCTACTCTTAAAGAAGCTCTCTCCTTAAACTACGAGGAAGCTAGGGCTTTGTTGGGGAGGCTTGAATTCCAAAGAGGGAATTTCGATGCTGCCCTTCAAGTATTTCAGGGGATTGACACCAAGGGTTTGACTCCAAGGATGATTAGGTCCATTTCTGAGAGAACCAAGCAAAGAAAACCACGTTCTAAGACCGATCACGTGCTTCCCTCCATAATGTCAAGGCATTCAGTAAGCCTGCTTCTTGAGGCTATTCTGCTCAAAGCTAAATCATTGGAGGCACTCGGACGCTACACGGAGGCTGCAAAGGAATGCAAAATAATTCTGGACACGGTTGATTCTGCACTACCAGCTGGAATGCCTCCAGGTTTTGGCGAAGATTGTAAACTGCAAGAGATGTTCCATCGAGCATTGGAGTTGCTTCCAGAACTTTGGACCAATGCAGGCCTACTAGATGAAGCTGTCACTGCATATCGACGGGCTCTGATCAAGCCGTGGAATTTGGAGCCACAAAGGCTGGCTGCCATTCAGAAAGATTTAGCTGTCACACTCCTTTATGGTGGTGTTGAAATAACCCTTCCATCTCATTTGCATGTGTGGGGTGTAACAACGCCGAAGACTAACACTGAAGAAGCTGTTCTGTTGTTACTAATACTTATGAGAAAGATAGTACTTCAGGAAATCGAATGGGATTCAGAATTATTAGATCATCTTTCATTTGCACTTTCGATTACTGGGATGTTTGAGTCATTGGCAGATCATGTTGAGCAGATCCTTCCAGGTGTTTATAGTCGTGCTGAGAGGTGGTACTTTCTTGCCCTGTGCTATAGTGCTGCAGGACAGAATGAGACAGCACTGAACCTTCTGATGAAAGTTTGTGGTAGTTCTGAAGCAAATCATATACCCCATTTCCCTTCCTTTTTATTGGGAGCAAAACTGTGTTCCCAAGATCCCAACCATGCCCGTGAGGGCATTAAATTGTCACAGAAACTGATTGATCTTGCCAAGCATCAGTGTGAGCACTTTCAGGGTCAAGGTCACAGATTTCTTGGTGTTTGCTATGGGGCTGCGGCTAGAATTTCTGTACTGGATTCTGAAAGAGTTATATGTCAAAGGGAGTCTTTGAATTCTTTAAACCAAGCTGCTGTAATTGGAAATTGGGACCCTGAAGTGATATTCAGCCTTGGATTGGAAAATGCAGTTCAAAGAAATCTGGTGGCAGCTTATGAGAACGCAGTGATGTACTCAGATATGATTGTTGGTAGCTCAAGAAAAGGTTGGCAACTGTTAGCACTCATAGTATCTGCACAGCACCGGTTCAAGGATGCTGAGACTGTAGTTGATTTTGCCTTAGACGAATCTGGAAGGACGGATCAGTTACAACTTTTAAGATTGAAAGCTGTGCTTCAAATTGCTCAGCAGCAACCTAAGCAAGCAATAGAGACCTACAGAATCTTGCTAGCGCTGATTCAAGCACGAAAGGAATTTTGGCTTGAATATGAGAACATCGATCCGGCAAACACGTTGAGACAAGAGGAATTAACAGAAAAAAAATTGGAAATGGAAGCCTGGCAAGATTTGGCAACCATTTATGCCGATCTAGGTGCCTTGCTTGATGCAAAAACTTGTGTAGACAAAGCCCAGCTGATAGAATTCTTTTCTCCCAGAAGTTGGCACATTACAGGGAAATTGTTTGAAGCAAAATCGTTATACAAGGAGGCCATTGTTTCTTTCACAATTGCGTTGTCGATGGAACCAGATCATGTCCCCAGCATCATTTCAACTGCAGAATTGTTGTTGAAAGCTGGTACACAAACACTTCCAATCGCAAGAAGCTTTTTAATGAACGCTCTGCGGTTGGAACCCACAAACCATGATGCGTGGTTCAACCTTGGATTGATTTCAAAAATGGAAGGTTCATTGCAGCAAGCAGCAGATTTCTTCCAAGCTGCATATGAGCTAAAGCTTTCAGCTCCAGTTGAAAGATTTGTGGGAGTAATTGAGACTTCGAGATGA 2169 0.4394 MLCACSGEQFKFEEPPHSPESLATRDFSASGLSSRTGDWESKFDDTQVDEAESTLKEALSLNYEEARALLGRLEFQRGNFDAALQVFQGIDTKGLTPRMIRSISERTKQRKPRSKTDHVLPSIMSRHSVSLLLEAILLKAKSLEALGRYTEAAKECKIILDTVDSALPAGMPPGFGEDCKLQEMFHRALELLPELWTNAGLLDEAVTAYRRALIKPWNLEPQRLAAIQKDLAVTLLYGGVEITLPSHLHVWGVTTPKTNTEEAVLLLLILMRKIVLQEIEWDSELLDHLSFALSITGMFESLADHVEQILPGVYSRAERWYFLALCYSAAGQNETALNLLMKVCGSSEANHIPHFPSFLLGAKLCSQDPNHAREGIKLSQKLIDLAKHQCEHFQGQGHRFLGVCYGAAARISVLDSERVICQRESLNSLNQAAVIGNWDPEVIFSLGLENAVQRNLVAAYENAVMYSDMIVGSSRKGWQLLALIVSAQHRFKDAETVVDFALDESGRTDQLQLLRLKAVLQIAQQQPKQAIETYRILLALIQARKEFWLEYENIDPANTLRQEELTEKKLEMEAWQDLATIYADLGALLDAKTCVDKAQLIEFFSPRSWHITGKLFEAKSLYKEAIVSFTIALSMEPDHVPSIISTAELLLKAGTQTLPIARSFLMNALRLEPTNHDAWFNLGLISKMEGSLQQAADFFQAAYELKLSAPVERFVGVIETSR 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1971 722 Gene3D Tetratricopeptide repeat domain 33 240 IPR011990 GO:0005515
Alju07g1971 722 Gene3D Tetratricopeptide repeat domain 552 656 IPR011990 GO:0005515
Alju07g1971 722 PANTHER PROTEIN NPG1 1 714 IPR043376 -
Alju07g1971 722 Pfam Tetratricopeptide repeat 46 89 - -
Alju07g1971 722 Gene3D Tetratricopeptide repeat domain 657 712 IPR011990 GO:0005515
Alju07g1971 722 ProSiteProfiles TPR repeat profile. 676 709 IPR019734 GO:0005515
Alju07g1971 722 SUPERFAMILY TPR-like 319 599 IPR011990 GO:0005515
Alju07g1971 722 SUPERFAMILY TPR-like 566 706 IPR011990 GO:0005515
Alju07g1971 722 Gene3D Tetratricopeptide repeat domain 259 547 IPR011990 GO:0005515
Alju07g1971 722 SMART tpr_5 606 639 IPR019734 GO:0005515
Alju07g1971 722 SMART tpr_5 511 544 IPR019734 GO:0005515
Alju07g1971 722 SMART tpr_5 572 605 IPR019734 GO:0005515
Alju07g1971 722 SMART tpr_5 676 709 IPR019734 GO:0005515
Alju07g1971 722 SMART tpr_5 133 166 IPR019734 GO:0005515
Alju07g1971 722 SMART tpr_5 317 350 IPR019734 GO:0005515
Alju07g1971 722 ProSiteProfiles TPR repeat profile. 606 639 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1971 Alju-ChrAlju07 45987108 45989896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1971 1 715 Calmodulin-binding Proteins AT1G27460 59.805 0.0 872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1971 07 45987108 45989896 Alju07g1971 07 45987108 45989896 ECH