Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1968 ATGGATCATTCACTGTCCAGCCTTCTCTGCCAAGAAAACCATCAAGGAGAGGTGGTGGTGGTGGATGAAGATTTATCCGTTCAGTTTGAGTATTCCGGTGTTTCAGAGGATGAGTATTTGCAAGTTTTGATTGAGAAAGAGATCCGCGTTGGGTTTGGAAGGGAAGAATCTTCTTTGTTGTTGATGGATGATTGGATCAAAACTGCTCGCTTGTATGCCATCAATTGGATTCTCAAAACAAGAGTAACATTCGGCTTCCGCTTTCAAACGGCTTACTTGTCTGTCACATACTTGGACCGATTCCTTTCTAGACGGTCCATTGATAATGAGAAGTGTTGGGCATTTCGGTTACTATCAGTTGCATGCCTTTCTTTGGCCGCTAAGATGGAGGAATGTGATGTTCCATCGCTATCAGAGTTTCCTTCACAAGATTATAACTTTGAAAGCAAAGTGATTCAGAGAATGGAGCTTTTGGTGCTCTCCACATTGGAATGGAACATGAACTTTACCACTCCTTTTGCCTTCTTACCTTATTTCATCTCAAAGTTCTCCAACCAATCCCCGCCACCTCATATCTGGTCCAACATTATGCAACTCATCTTCACATTAATGACAGAGGTCAATTTGATGGATCATAGGCCATCTGTGATAGCAGCAGCAGCTACTTTGGTGGCAATTGATCCGCATTTGACAAGAAATACATCAGAATTGAAGATTATGAGTTCAGTTTCTCAATATTGGAGTCTCGAAATTGAGAACATATTTGCGTGCTATGATCTAATCCAGAGATTATACAAGGAGAAAACTGAAAGAGACAAGGTTATACATTCCTCGAGTCGTCCTCCTCCGCCTAAGGGATCGGTGGCGCCAATCGACAAGCTTGAGACTTCTGTAGTTAGTTCGTCCAAGAGAAGAAGACTCGCATTCACTGATCATGAAGAAGGTCAAGGCAAACAAGAGGGAAGTTAA 969 0.4231 MDHSLSSLLCQENHQGEVVVVDEDLSVQFEYSGVSEDEYLQVLIEKEIRVGFGREESSLLLMDDWIKTARLYAINWILKTRVTFGFRFQTAYLSVTYLDRFLSRRSIDNEKCWAFRLLSVACLSLAAKMEECDVPSLSEFPSQDYNFESKVIQRMELLVLSTLEWNMNFTTPFAFLPYFISKFSNQSPPPHIWSNIMQLIFTLMTEVNLMDHRPSVIAAAATLVAIDPHLTRNTSELKIMSSVSQYWSLEIENIFACYDLIQRLYKEKTERDKVIHSSSRPPPPKGSVAPIDKLETSVVSSSKRRRLAFTDHEEGQGKQEGS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1968 322 SMART Cyclin_C_2 170 283 IPR004367 -
Alju07g1968 322 CDD CYCLIN_AtCycD-like_rpt2 170 261 - -
Alju07g1968 322 MobiDBLite consensus disorder prediction 305 322 - -
Alju07g1968 322 Gene3D - 68 168 - -
Alju07g1968 322 SMART cyclin_7 75 161 IPR013763 -
Alju07g1968 322 Pfam Cyclin, N-terminal domain 67 168 IPR006671 -
Alju07g1968 322 SUPERFAMILY Cyclin-like 153 273 IPR036915 -
Alju07g1968 322 Pfam Cyclin, C-terminal domain 171 274 IPR004367 -
Alju07g1968 322 FunFam Cyclin-D5-1 65 168 - -
Alju07g1968 322 Gene3D - 169 259 - -
Alju07g1968 322 ProSitePatterns Cyclins signature. 70 101 IPR006671 -
Alju07g1968 322 PANTHER CYCLINS 42 265 IPR039361 -
Alju07g1968 322 CDD CYCLIN_AtCycD-like_rpt1 69 165 - -
Alju07g1968 322 MobiDBLite consensus disorder prediction 271 322 - -
Alju07g1968 322 SUPERFAMILY Cyclin-like 36 168 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1968 Alju-ChrAlju07 45945759 45947121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1968 70 220 Core Cell Cycle Gene Families AT4G37630 47.500 6.06e-40 139