Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1964 ATGGGGACGGAGAGTTCATTGAATTTCACATACATGGGAAGGAGTATCAGCGAATTAGGCATCAATGATCATTCCTCTTCTGCTTTCAGCGATTGTAACAGTGACAGATCCGGTGAATTCACGATGGCTTCTTCCCAGAGCCGAGACCTCCTGATTGCTTGTGCCTCCGATAATTCCGATGATTTTATCGCTCACCTGGTGAACCATCTCCAGTCTTGTTCGATTGACGACCAGAAGCAAGCCGCCATGGAGATTAGACTACTCGCCAAGAACAAGCCGGAAAACCGCCTTAAAATCGCCAAATCCGGCGCTATTAAGCCCTTGATTTCGCTTATGTCCTCGCCTGACCTCCAACTCCAAGAGTACGGCGTCACCACGATTTTGAATCTCTCACTGTGCGAAGAGAATAAGGAGCTTATAGTTTCGTCGGGAGCGACAAAGCCTCTGGTTCGAGCACTCAAGACAGGGACATCGACGGCCAAAGAGAACGCCGCATGTGCTCTGCTTCGCCTTTCGCATATAGAACAGAACAAAGTGGCAATCGGACGGTCGGGAGCGATTCCACTGCTAGTGAACCTTCTAGAGAGTGGCGGTTTACGAGGGAAAAAGGATGCTTCCACGGCGCTGTACTCGCTCTGTTCTGTGAAGGAGAATAAATTAAGGGCTGTGCGAGCCGGGATAATGAAGCCGTTAGTGGAATTAATGGCTGATTTTGGATCAAACATGGTGGATAAGTCAGCCTACGTGTTGAGCGTGCTGGTATCGGTGCCGGAGGCGAGAACCGCGTTGGTGGAGGAAGGAGGAATTCCGGTGCTGGTGGAAATCCTAGAGGTGGGGTCGCAAAGACAGAAGCAAATAGCGGTGGTTATACTATTACAGATTTGCGAGGACAACGCCACCTACCGCACTATGGTGGCCCGCGAAGGAGCGATACCACCGCTGGTGGCTCTGTCGCAGTCCGGCGCCACTAGCTCCAAGCACAAGGCGGAGACGCTAATAGAGCTTCTGCGGCAACCAAGATCCGGCGCCGCCGCTGATCGTGCTACGGAGGTCTCGGCCTAA 1062 0.5235 MGTESSLNFTYMGRSISELGINDHSSSAFSDCNSDRSGEFTMASSQSRDLLIACASDNSDDFIAHLVNHLQSCSIDDQKQAAMEIRLLAKNKPENRLKIAKSGAIKPLISLMSSPDLQLQEYGVTTILNLSLCEENKELIVSSGATKPLVRALKTGTSTAKENAACALLRLSHIEQNKVAIGRSGAIPLLVNLLESGGLRGKKDASTALYSLCSVKENKLRAVRAGIMKPLVELMADFGSNMVDKSAYVLSVLVSVPEARTALVEEGGIPVLVEILEVGSQRQKQIAVVILLQICEDNATYRTMVAREGAIPPLVALSQSGATSSKHKAETLIELLRQPRSGAAADRATEVSA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1964 353 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Alju07g1964 353 SMART arm_5 298 337 IPR000225 GO:0005515
Alju07g1964 353 SMART arm_5 215 255 IPR000225 GO:0005515
Alju07g1964 353 SMART arm_5 133 173 IPR000225 GO:0005515
Alju07g1964 353 SMART arm_5 174 214 IPR000225 GO:0005515
Alju07g1964 353 SMART arm_5 256 296 IPR000225 GO:0005515
Alju07g1964 353 SMART arm_5 92 132 IPR000225 GO:0005515
Alju07g1964 353 Pfam Armadillo/beta-catenin-like repeat 134 172 IPR000225 GO:0005515
Alju07g1964 353 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Alju07g1964 353 Pfam Armadillo/beta-catenin-like repeat 176 214 IPR000225 GO:0005515
Alju07g1964 353 SUPERFAMILY ARM repeat 59 329 IPR016024 -
Alju07g1964 353 Gene3D - 30 158 IPR011989 -
Alju07g1964 353 FunFam RING-type E3 ubiquitin transferase 52 342 - -
Alju07g1964 353 Gene3D - 159 252 IPR011989 -
Alju07g1964 353 PANTHER U BOX DOMAIN-CONTAINING 63 337 - -
Alju07g1964 353 Gene3D - 253 345 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1964 Alju-ChrAlju07 45900497 45902191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1964 63 345 U-box Gene Family AT2G23140 48.057 6.35e-80 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1964 07 45900497 45902191 Alju08g1014 08 7670537 7672991 CCT