Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1960 ATGGAGCCACTTGGAGTCATCCCTGATGAGGAAATGAGTTGCTTTCAAGGAATATTTGCCTCGGAAGAGCATCATTACTCGCCACAATTTCTTGGCCAAAGCTCACTTCTGCTCGGGGAACGAGATCGAATGCTCATAGGATTAGAATCTACATTTTGCTTTGCTCCTGAAGCTGCAGAAAATGAGTGCATGTTTAATTCTTTAGATGCTCTCAACCCAGATTTGCAGTTTATTTCGCAAGAAAGTAGTTTCAGTAGTGACTGTAGTGGCGATGCTTTCTTCCTTGCCAACCCGGGTCATATGAACTACTATCTCAGTGATCCTAATCAGGCACTAGCAAATGATGCCTACATGTTCATGAATGTTTGCATGATGCATGAGAACGACACTGGCACTTTCATCCCATCACCAGGAAACGCTTTGGTGGAAGAAACTGTTAGCTTTAATGAAGGCAGGAGAGGGGACAAACTGGAGAATTTTTATCAAAGTCAAGCTGAATTCACAGCTTTTGCGCCCGAAAAGATGCACCTGAAAAGGAAGTTTGATGTGCCAGAACTGGAGGCCTCAGCGGAAGATAAAATAAACAAAAATTCATCATCTGAGAACCAGAAGAAGAAACCTCGTGTTTCAAGAGAGGTTGAAAAGAGTAAGAAGAATGCGCAGCTAAAGAAGAACCAAAAGGTTGCGGGAAATGGCTATGGGGCAGAAGAGACCGATACTGGATTACATGGACAGAGCTGTAGTAGTTACAGCTTAGAGGATGACGATGCTTCTCAGGAAAATAGTGGAGGAGCTTCCTCAGAGTCCAAATCACCAGTGACTCACAACACAAATGGGAAGACCAGAGCCAGTAGGGGATCAGCAACAGATCCCCAGAGCCTTTATGCCAGGAAAAGAAGAGAGAGAATAAATGAACGACTGAGAATCCTACAGAATCTTGTTCCAAATGGAACAAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTCCATTACGTGAAATTTTTGCAGCTCCAAATTAAGCTTTTGAGTTCTGATGACATGTGGATGTACGCTCCAATTGCTTATAATGGAGTTGACATTGGATTGAATCTCAGCCGCAAGATTTCTCCACAGGCATGA 1122 0.4332 MEPLGVIPDEEMSCFQGIFASEEHHYSPQFLGQSSLLLGERDRMLIGLESTFCFAPEAAENECMFNSLDALNPDLQFISQESSFSSDCSGDAFFLANPGHMNYYLSDPNQALANDAYMFMNVCMMHENDTGTFIPSPGNALVEETVSFNEGRRGDKLENFYQSQAEFTAFAPEKMHLKRKFDVPELEASAEDKINKNSSSENQKKKPRVSREVEKSKKNAQLKKNQKVAGNGYGAEETDTGLHGQSCSSYSLEDDDASQENSGGASSESKSPVTHNTNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMYAPIAYNGVDIGLNLSRKISPQA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1960 373 MobiDBLite consensus disorder prediction 241 291 - -
Alju07g1960 373 Gene3D - 289 345 IPR036638 GO:0046983
Alju07g1960 373 SMART finulus 293 342 IPR011598 GO:0046983
Alju07g1960 373 MobiDBLite consensus disorder prediction 188 299 - -
Alju07g1960 373 MobiDBLite consensus disorder prediction 188 221 - -
Alju07g1960 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 287 353 IPR036638 GO:0046983
Alju07g1960 373 CDD bHLH_AtIND_like 288 350 - -
Alju07g1960 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 287 336 IPR011598 GO:0046983
Alju07g1960 373 FunFam Basic helix-loop-helix transcription factor 288 345 - -
Alju07g1960 373 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 129 359 - -
Alju07g1960 373 Pfam Helix-loop-helix DNA-binding domain 297 337 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1960 Alju-ChrAlju07 45852486 45854091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1960 253 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 76.271 1.01e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju07g1960 HLH 1.8e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1960 07 45852486 45854091 Alju07g1960 07 45852486 45854091 ECH