Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1938 ATGCATATCTTAGTCGTCTTCCTCCTTTCTTTTGCTCTGTGTAGTCCTTCTTCTTGTTCATCTGCAGCCACAGATACCCTCCTTCAAGGTTCTTCTCTCTCAGTTGAGAAACCAAACGATACACTCGTGTCAGCCAATGGTGTCTTCTCCGCTGGCTTCTTTAAAGTGGGCGACAATGCTTTCTGCTTTTCCATATGGTTCACAAAATCCAATCAACCCACTCTTGTCTGGATCGCAAATCGAGATCAACCCGTTAATGGGAAAGCTTCAAGATTAACACTTTCCAACAAAGGCAACCTCATTTTGAGCGATGCAGGGGCAACCACCATTTGGACCACAACGACGTCGTCCTCTTCGGAAGTGTATCTCATGCTTAGGGACAACGGCAACCTCGTACTTCGTACTTCGCAAGGCACTGTCTTATGGCAAAGCTTTGACTCCCCAACCGATACCCTTCTTCCTGGCCAACCACTCACAGAGAAAGCCAGCCTTATTTCATCCAGAAGCATCACCAACTTTTCCTCTGGTTTCTATAAGCTTTACTTCGACAGCGACAATGTTCTTCGGCTTCTTTTCAAAGGCCCTAAAGTTTCTAGCGTATACTGGCCTGTCACGTGGAAACTTCCCGTTGATGAAGGCAGGTCCACCTACAACATAACTAAAATTGCTCTGCTTGATCCCTTTGGCCATTTCACTTCCTCTGATACTTTCCAATTCTATCCATCTGATTATGGTGTTAAACGCTATAGGCGATTCAAGGTGGATTCTGATGGTAACTTGCGTCTCTATAGCTTCAATGAAGAAACTAGCATGTGGGAGGTCACATGGCAAGTCATTGCCGAACCATGTACGGTTCATGGTCTCTGTGGAGCTAACAGTATGTGCACTTATGACCCTTTCTTAGGAAGGACTTGCTATTGCTTACAAGGATTCAAGATTAAGAATCCTAATGACTGGACTCAGGGTTGTGAACCTGAATTTACAACCCCTCGTTGCAATAATTCCGCAGAGTTTGGTTTTGTTCATCTTCCCAGAATGGAATTATTCGGCTATGACCTGGAGGTAATCCGTGTAACAAACTTGACACAATGTGAAAATAGGTGCTTGGAGCTTTGTGATGATTGTAAAGGCGTCCAACTCAAATTCAACGAAGTTAGTACTTACAATTGCTACATCAAAACAATATTGCTCAACGGACGAGATTCCTCTAATTTCGATGGAGATGTCTATCTCAAATTGCCAAAATCAACTCTGCTTTCCCTTAAAGTTCCTCTGAAACATGTGCCATTGAAGTGTTCAGCCAATCTATCTCAGAGCTTGGATAGAACCTACCAAGATCCCAAAAAGAGCACGTGGTTGAATTTTTTGCTTTGGTTCGTTTGTGGGATTGGAGCGTTCGAGATTACCTGCATTTTCTTCGTATGGTTCTTCTTGTTTAGAAGCAGTAAGGAAAATGATAAAGGAGAGAGACAGCAACTAATTTCTGCTACAGGGTTCCAAAGGTTCACCTATTCAGAGCTCAAAAAGGCGACACGTGGATTCATCGATGAGGTAGGACGAGGAGCAGGAGGGATCGTGTACAAAGGGGCACTAGACAACAATCGTGTGGCAGCAATCAAGTGCCTTATTAATGAAACTAATCAAGGAGAAGCAGAGTTTCTGGCTGAACTTGGGACGATTGGGATGTTGAACCACATGAATTTGATAGACATGTGGGGATACTGCGTGGAGGGGAAGCACAGAATGTTAGTGTACGAGTACATGGAGCATGGATCTTTAGCAGAGAATCTCTGTTCCAATTCACTTGACTGGAACAAAAGGTTTAATATTGCAGTTGGGACAGCCAGAGGTTTAGCTTATTTGCACGAAGAATGCTTGGAATGGGTTCTGCATTGCGATGTGAAGCCTCAAAACATACTCTTAGACTCAGAGTTCCAACCCAAAGTAGCTGATTTTGGCTTGTCTAAGCTGCTTAATAGGGACGACGAGCGTGCCAATTCTGGTTTTTCCAGAATAAGAGGGACGAGAGGGTACATGGCTCCAGAATGGGTGTACAATCTGCGAATTACTTCTAAAGTGGATGTATATAGCTATGGAATCGTGGTGTTGGAAATGATAACTGGAAAAAGTCCAATGGGAATCCATAGCCAAGAAAACAATGGAGGAATAGATCAACGGAGGTTGGTGACGTGGGTGAAGGACAAGTTGAATGGTGCTTCTGATGAGATAGCAGATGGGAATATGGAAGGAAATTACGAGGCTGCAAAGTTGGAATTGTTGGTGAAAGTGGCTTTGCAGTGTGTGGAAGATGACATGGACGCAAGGCCCTCCATGAGCCAAGTAGTGGAGATGCTTCAGTTTCCAGAACATAGATCCTTCCAATAA 2385 0.4394 MHILVVFLLSFALCSPSSCSSAATDTLLQGSSLSVEKPNDTLVSANGVFSAGFFKVGDNAFCFSIWFTKSNQPTLVWIANRDQPVNGKASRLTLSNKGNLILSDAGATTIWTTTTSSSSEVYLMLRDNGNLVLRTSQGTVLWQSFDSPTDTLLPGQPLTEKASLISSRSITNFSSGFYKLYFDSDNVLRLLFKGPKVSSVYWPVTWKLPVDEGRSTYNITKIALLDPFGHFTSSDTFQFYPSDYGVKRYRRFKVDSDGNLRLYSFNEETSMWEVTWQVIAEPCTVHGLCGANSMCTYDPFLGRTCYCLQGFKIKNPNDWTQGCEPEFTTPRCNNSAEFGFVHLPRMELFGYDLEVIRVTNLTQCENRCLELCDDCKGVQLKFNEVSTYNCYIKTILLNGRDSSNFDGDVYLKLPKSTLLSLKVPLKHVPLKCSANLSQSLDRTYQDPKKSTWLNFLLWFVCGIGAFEITCIFFVWFFLFRSSKENDKGERQQLISATGFQRFTYSELKKATRGFIDEVGRGAGGIVYKGALDNNRVAAIKCLINETNQGEAEFLAELGTIGMLNHMNLIDMWGYCVEGKHRMLVYEYMEHGSLAENLCSNSLDWNKRFNIAVGTARGLAYLHEECLEWVLHCDVKPQNILLDSEFQPKVADFGLSKLLNRDDERANSGFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMITGKSPMGIHSQENNGGIDQRRLVTWVKDKLNGASDEIADGNMEGNYEAAKLELLVKVALQCVEDDMDARPSMSQVVEMLQFPEHRSFQ 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1938 794 CDD STKc_IRAK 518 786 - -
Alju07g1938 794 SMART serkin_6 512 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1938 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 203 IPR036426 -
Alju07g1938 794 ProSiteProfiles PAN/Apple domain profile. 332 414 IPR003609 -
Alju07g1938 794 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Alju07g1938 794 Pfam D-mannose binding lectin 74 161 IPR001480 -
Alju07g1938 794 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Alju07g1938 794 FunFam S-receptor-like serine/threonine-protein kinase 481 587 - -
Alju07g1938 794 Gene3D - 18 146 IPR036426 -
Alju07g1938 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Alju07g1938 794 Gene3D Transferase(Phosphotransferase) domain 1 588 792 - -
Alju07g1938 794 PANTHER OS07G0415500 PROTEIN 6 786 - -
Alju07g1938 794 FunFam Putative receptor-like protein kinase 588 791 - -
Alju07g1938 794 SMART blect_4 33 148 IPR001480 -
Alju07g1938 794 ProSiteProfiles Protein kinase domain profile. 512 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1938 794 CDD PAN_AP_plant 328 414 - -
Alju07g1938 794 SMART ntp_6 335 413 IPR003609 -
Alju07g1938 794 CDD B_lectin 37 148 IPR001480 -
Alju07g1938 794 Pfam Protein kinase domain 516 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1938 794 PIRSF SRK 1 790 IPR024171 GO:0004674
Alju07g1938 794 Gene3D Phosphorylase Kinase; domain 1 478 587 - -
Alju07g1938 794 Pfam S-locus glycoprotein domain 244 314 IPR000858 GO:0048544
Alju07g1938 794 SUPERFAMILY Protein kinase-like (PK-like) 491 788 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1938 Alju-ChrAlju07 45683598 45685982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1938 454 786 Receptor kinase-like Gene Family AT5G45780 37.318 2.61e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju07g1938 Pkinase 3e-51 CL0016