Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1937 ATGGGCGCCGAGAGCGTGACGATACGTGTAACTCTCACAGACTCTAATTTGACGCGTGTCTCCCTGACAGCTATAACAGAGAGCCCAGCTAGAAAGCCATCGAGAGCAGTGGTCTTCCCTCCCACACCGCCTTTCATCTCCATGGCTTCTTTGAAGAAAGATATCGACCGTATTAAAGGCCCGTGGAGCCCTGAGGAAGATGAAGCCTTGCAGAGACTCGTTCAATGTTACGGTGCCAGAAACTGGTCTCTGATCAGCAAGTCCATCCCCGGTCGATCCGGCAAGTCCTGTCGTTTGCGGTGGTGCAACCAGCTCTCTCCCAACGTCGAGCGCCGGCCTTTCACGCCCGAGGAGGACGAAACCATCATCAGAGCACACGCCAGGTTCGGCAACAAGTGGGCCACAATCTCTCGCTTGCTCCATGGTCGCACCGACAACGCCATCAAAAACCACTGGAATTCCACTCTCAAGAGGAAATGCTCCGCCATCACCGATCCTTTCAATCCCGAATCCGACGACCACCAGCCTCTTAAAAGATCTGCCAGCGTCGATGCCGCCCCAACGGTCTCCGGATTGTACTTGAGCCCGAGTAGCCCATCCGGATCCGATTTGAGCGATACCAGTTTGCCCGCTATGTCTCCCACGCGGGTTTGCAGACCCTTTGCTAGGAACACCGCCCCAATCCCCTGCACCCAACAACCGGAAGATGCCACCTCCGCTCATGATCCACCGACATCACTATGCCTGTCACTTCCTGGATCCGATTCGCACGAGGCCTCCAACCATGGGTCCGGATCGAATCTGCCTGTAAGCCCGACCCAGTTACCGCCAAGTCCGCCATCGCCAGCGCCTGCCGCACCAGCTGTAGGAGCATCAATACAGCAAGTGCGTCTCCCAGCTCCTGCCAGTCAGAGATGTGATCAGTTTGGGTGGGAGAAACAATTTTTCAGCGCCGAGTTTTTGGCGGTTATGCAAGAGATGATAAAGAAGGAAGTGAGGAATTACATGTCTGGGATAGAGCCGAACGGTGCGTGTATTCAGACGGAAGCCATTAGAAACGCTGTGATGAAGAGCATCGGAATGGGCAGGGTCGAGTAA 1098 0.5519 MGAESVTIRVTLTDSNLTRVSLTAITESPARKPSRAVVFPPTPPFISMASLKKDIDRIKGPWSPEEDEALQRLVQCYGARNWSLISKSIPGRSGKSCRLRWCNQLSPNVERRPFTPEEDETIIRAHARFGNKWATISRLLHGRTDNAIKNHWNSTLKRKCSAITDPFNPESDDHQPLKRSASVDAAPTVSGLYLSPSSPSGSDLSDTSLPAMSPTRVCRPFARNTAPIPCTQQPEDATSAHDPPTSLCLSLPGSDSHEASNHGSGSNLPVSPTQLPPSPPSPAPAAPAVGASIQQVRLPAPASQRCDQFGWEKQFFSAEFLAVMQEMIKKEVRNYMSGIEPNGACIQTEAIRNAVMKSIGMGRVE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1937 365 PANTHER MYB PROTEIN-RELATED 59 231 - -
Alju07g1937 365 MobiDBLite consensus disorder prediction 226 289 - -
Alju07g1937 365 SMART sant 58 107 IPR001005 -
Alju07g1937 365 SMART sant 110 158 IPR001005 -
Alju07g1937 365 MobiDBLite consensus disorder prediction 191 211 - -
Alju07g1937 365 Pfam Myb-like DNA-binding domain 62 120 - -
Alju07g1937 365 Gene3D - 58 110 - -
Alju07g1937 365 ProSiteProfiles Myb-like domain profile. 106 156 IPR001005 -
Alju07g1937 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 160 IPR017930 -
Alju07g1937 365 Gene3D - 112 182 - -
Alju07g1937 365 FunFam Transcription factor MYB44 113 159 - -
Alju07g1937 365 FunFam MYB transcription factor 59 110 - -
Alju07g1937 365 CDD SANT 61 103 IPR001005 -
Alju07g1937 365 SUPERFAMILY Homeodomain-like 56 152 IPR009057 -
Alju07g1937 365 MobiDBLite consensus disorder prediction 272 286 - -
Alju07g1937 365 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Alju07g1937 365 MobiDBLite consensus disorder prediction 226 271 - -
Alju07g1937 365 CDD SANT 113 156 IPR001005 -
Alju07g1937 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 109 IPR017930 -
Alju07g1937 365 MobiDBLite consensus disorder prediction 163 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1937 Alju-ChrAlju07 45667846 45669182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1937 56 365 MYB Transcription Factor Family AT5G67300 51.875 3.19e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g1937 Myb_DNA-bind_6 1.3e-17 CL0123