Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1928 ATGGCTGTGGAGCTTATATCGGGTTATGGGGATGATAGTTTTGCAGGCAGGACGGAACTAGACAACACAATCGCGGTGCAGGAAGCTACAGCCGCCGGCATTCACAGCGTCGAGAAGCTCATGACAATAATTTCTCAGCACCGAGAGGAGGAGGCTTCCGGCTCCCGAGGAGAACCTTCGGAACTGGAAGTTCTGGCAGATACGGCAATGAACAAGTTCAAAAGGGTTATTTCTCTGTTGGACCGGCCAAGAGTTGGCCACGCTCGTTTCAGAAAAGCTCCTCCGACGACGCAGGCTTCGATTCCTTTCCTCCAGCCGCAGCAGACGCTGGATTCTGAAACCCCAGTGCCTCCTGTTACAGAACACCAACACAACAAAACAGAGCAACCCTCTGCTTTTAAGGTTTATTGCCCCACGCCGGTTTTACGTCTCCCACCTCTGCCTCACCAGGCGCACCAATCTTCCCCCTTTCATCGGGTGGAGAAGAAGGAGGCAAACGGAAGTGTCCAGTTTTCGGCGTCGCCGCCAGTATCCGCCGCCAATTCGTACATGTCAGTGTTAACAGGGGATACTGATAGTATGCAGCGTTCTTGTCATTCTTCGGGGTTCCAAATCATTCACAGTCAGAGATCACAACAGGGATCCTACATGGGCAAGCCACCATTGTGTTCGAGTTCTTTAAAGAGGAAGTGCAATTCAATGGACGATGCCGGTCTCAAGTGTGGATCATCTTCGGGTCGCTGCCATTGCTCCAAGAAAAGGAAATCAAAGGTAAGGAGAGTGGTCAGAGTACCGGCAATCAGCTCGAAGATGGCTGATATTCCGGCGGATGAATATTCGTGGAGAAAATATGGACAAAAACCCATTAAGGGTTCTCCTCATCCCAGGGGTTATTACAAATGTAGTAGCGTGAGAGGCTGCCCAGCACGCAAACACGTGGAGCGTGCTCTGGATGATCCAACCATGCTTATTGTCACCTACGAAGCTGATCATAATCACTCGCTGGAGGTTGCAGCCGCCGTAGTCCTCGAATCATCCTAG 1041 0.513 MAVELISGYGDDSFAGRTELDNTIAVQEATAAGIHSVEKLMTIISQHREEEASGSRGEPSELEVLADTAMNKFKRVISLLDRPRVGHARFRKAPPTTQASIPFLQPQQTLDSETPVPPVTEHQHNKTEQPSAFKVYCPTPVLRLPPLPHQAHQSSPFHRVEKKEANGSVQFSASPPVSAANSYMSVLTGDTDSMQRSCHSSGFQIIHSQRSQQGSYMGKPPLCSSSLKRKCNSMDDAGLKCGSSSGRCHCSKKRKSKVRRVVRVPAISSKMADIPADEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTMLIVTYEADHNHSLEVAAAVVLESS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1928 346 Pfam WRKY DNA -binding domain 277 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g1928 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 336 IPR044810 GO:0003700
Alju07g1928 346 Gene3D WRKY domain 257 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g1928 346 FunFam WRKY transcription factor 65 259 336 - -
Alju07g1928 346 SUPERFAMILY WRKY DNA-binding domain 273 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g1928 346 MobiDBLite consensus disorder prediction 109 129 - -
Alju07g1928 346 SMART WRKY_cls 275 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g1928 346 ProSiteProfiles WRKY domain profile. 270 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g1928 346 Pfam Plant zinc cluster domain 228 273 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1928 Alju-ChrAlju07 45570084 45571353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1928 1 296 WRKY Transcription Factor Family AT4G24240 45.652 3.11e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju07g1928 WRKY 3.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1928 07 45570084 45571353 Alju07g1928 07 45570084 45571353 ECH