Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1926 ATGAGCAAGGTTCCTCCAAAAATTCTAGTTTCAACTTTGTACCTCCTCATATTGTCCTTTCCTGTCCAAACTCTAGCACATGCTGATACAGACAACAGTCAAAGTGGTGAAGGTGAGGTTTTCAGCAAAAGCTGCAACAATGAATTCCACTCAGTACCCTTCTCTTCCTCATGTCAAAAATCAAAAAGCACTGAAGCATCTCCAGTTTTACCTCTCCAAACAAATGGTTTGGTATCTGCAGATCAGAGACTTCAAGTTGCATACCCAGTGATCCAAAAATTCAAGTCTAGCATCACCTCTGATCCATTAGGTGTCACCAAATCATGGGTTGGCTCTGATATTTGCAACTACAAAGGTTTCTACTGTGATAATCCCCCAGATAACACCTCAGCCATTGCTGTGGCTTCCATTGATTTCAATGGATTTCAACTTGGAGCTCCATCACTTGATGGCTTCATTGATCAGCTTCCTGATATTGCTCTGTTCCATGCAAATTCCAACAATTTTAGAGGCACCATCCCCACCAAAATCTCCAAGCTCCCTTATCTTTATGAGCTTGATGTAAGCAACAACCAGCTATCCGGTCCATTTCCCATGGCTGTGTTGGGCATGAACACCCTAACATTCTTGGACCTTCGCTTCAACTTGTTCTCTGGGCAAGTCCCGCCTCAGATATTCAGCCAGAATCTTGATGTCCTCTTCATCAACAACAATGACTTCACTCAGAGCTTGCCTGATAACCTAGGCAGCACCCATATTCTTTATCTCACCTTAGCCAACAACAAATTCGTGGGTCCTATACCTAGAAGCCTCCCTAAAGCTTTGTCCACTCTCACTGAGGTACTATTCTTGAACAACCAGTTAACAGGTTGTATCCCATATGAGATTGGGTTACTAGAAGAGGCTAGAGTGTTTGATGCTGGGAACAACCAGTTAACAGGTCCATTGCCTATGTCTTTGGGTTGCCTTGAGCAGTTGCAACTTCTAAATTTGGCTGGTAATCTTCTGTATGGTATGGTACCAGAAGTGGTGTGTGGACTAGAGAATTTGGTCAATTTATCACTTTCAGACAATTATTTCACACATGTAGGACCTTTGTGTATGAGCTTAATTCAGCGAGGGGTTCTTGATATTAGGAACAATTGCATTCCTTACCTTCCATTCCAGAGATCAGTGATCGAGTGTGCAGATTTCTTTGCGCACCCCAGATTGTGTTCCCACTTGTGGTTTCATAGTTTCATTCCTTGCAAGTTTTCTTTCCACAAGTCTTCAGTCTCTGCCATTCCTAAGATAGCTCCTCCTTCTCCTTGA 1311 0.4294 MSKVPPKILVSTLYLLILSFPVQTLAHADTDNSQSGEGEVFSKSCNNEFHSVPFSSSCQKSKSTEASPVLPLQTNGLVSADQRLQVAYPVIQKFKSSITSDPLGVTKSWVGSDICNYKGFYCDNPPDNTSAIAVASIDFNGFQLGAPSLDGFIDQLPDIALFHANSNNFRGTIPTKISKLPYLYELDVSNNQLSGPFPMAVLGMNTLTFLDLRFNLFSGQVPPQIFSQNLDVLFINNNDFTQSLPDNLGSTHILYLTLANNKFVGPIPRSLPKALSTLTEVLFLNNQLTGCIPYEIGLLEEARVFDAGNNQLTGPLPMSLGCLEQLQLLNLAGNLLYGMVPEVVCGLENLVNLSLSDNYFTHVGPLCMSLIQRGVLDIRNNCIPYLPFQRSVIECADFFAHPRLCSHLWFHSFIPCKFSFHKSSVSAIPKIAPPSP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1926 436 Pfam Leucine rich repeat N-terminal domain 92 123 IPR013210 -
Alju07g1926 436 Gene3D Ribonuclease Inhibitor 251 395 IPR032675 -
Alju07g1926 436 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 49 418 - -
Alju07g1926 436 Gene3D Ribonuclease Inhibitor 89 249 IPR032675 -
Alju07g1926 436 SUPERFAMILY L domain-like 92 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1926 Alju-ChrAlju07 45543563 45544873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1926 77 402 Leucine-rich Repeat extension Gene Families AT3G24480 44.479 1.95e-89 278