Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1915 ATGGAAGAAAGAGAGTGCTGTTCGAGGGATTCGACGATCACGACGAGCAGAAGCAGCCCGCTGGAGAAGCCACGGAAGCAGGAGAGGCAGCACCACCAAAAAGCGGCGGCGAAGGACAAACCATACAGAGGGATAAGGATGAGGAAGTGGGGCAAGTGGGTGGCTGAGATCAGAGAACCAAACAAGAGGTCAAGGATTTGGCTTGGTTCTTACACCACACCCATCGCCGCCGCACGCGCTTACGACACCGCCGTTTATTATCTCCGAGGCCCTTCTGCCTCCCTCAACTTCCCCGAACAGTTGTTCCAAGACGGCGGCGACGCCCTCACCCGCGGCGACTTGTCCGCCGATTCCATTCGTAAGAAAGCCACCGAAATCGGCGCAAGAGTTGACGCCCTCCAAACCGCCCTTCACGCCGCCGCCTCCTCTCCCTCCACCAGTTCTAGCCAAACCACCTCCCAAAAACCCGACTTGAATGAGTACCCGCAACCCGAAGAAGACTCCGTCGAGGATTAG 516 0.5775 MEERECCSRDSTITTSRSSPLEKPRKQERQHHQKAAAKDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVYYLRGPSASLNFPEQLFQDGGDALTRGDLSADSIRKKATEIGARVDALQTALHAAASSPSTSSSQTTSQKPDLNEYPQPEEDSVED 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1915 171 CDD AP2 42 100 IPR001471 GO:0003700|GO:0006355
Alju07g1915 171 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Alju07g1915 171 PRINTS Ethylene responsive element binding protein signature 80 100 IPR001471 GO:0003700|GO:0006355
Alju07g1915 171 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Alju07g1915 171 MobiDBLite consensus disorder prediction 138 159 - -
Alju07g1915 171 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Alju07g1915 171 MobiDBLite consensus disorder prediction 1 41 - -
Alju07g1915 171 FunFam Ethylene-responsive transcription factor 2 40 99 - -
Alju07g1915 171 MobiDBLite consensus disorder prediction 137 171 - -
Alju07g1915 171 MobiDBLite consensus disorder prediction 21 41 - -
Alju07g1915 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 25 167 - -
Alju07g1915 171 Pfam AP2 domain 42 90 IPR001471 GO:0003700|GO:0006355
Alju07g1915 171 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Alju07g1915 171 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1915 Alju-ChrAlju07 45463564 45464079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1915 40 171 AP2-EREBP Transcription Factor Family AT2G23340 56.164 7.94e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju07g1915 AP2 1.9e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1915 07 45463564 45464079 Alju07g1915 07 45463564 45464079 ECH