Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1904 ATGACGAGCTACGCGTTTCTGAACGATGAGCTCTCAAAGCATACCTCCATTTTTGGGTTACGACTGTGGGTGGTGCTGGGAATATGCGTCGGAGCAGCCATTGTCATTGTACTGTTTATCATATCACTCTGGTTCACTGCTAAACGCAATAATGCTTCAAAGCTCAAGTCTTGTCATAAACCAACCAACATCAACATACCAAATGTGTCCAAGGAGATTCAGGAAATCCGGATTGACCATTCTCGTGAACCAACCAAGCCAAACCTTGTGCCCGACCCCAACCCGTTTCCGGAATCGCAGTCCGAGGCTCTGGATAGAGCCCAAGCCATTCTTCTTCAGCAGGAAGACGAAAGCCCAGGAACAGGGCCCCACAAAATTCACATTGAAATCGGAAAGGACCACCGGATTTCGTACCCTGAGAGGGGTGGTGGTTCGTCGCATGGCAGCGGGGAGGTTCGGTCCGGTGAGCAACCCTCCATTGCTGTGCCGGAAGTTTCTCATTTGGGTTGGGGCCATTGGTACACTCTTCGAGAGCTTGAGGTCTCCACCAGTTTTTTCGCCGATGAGAATGTCATAGGTGAAGGTGGCTACGGAATTGTTTACCGAGGGGTGTTGCGAGATAATACCAATGTTGCTGTTAAAAATTTGCTCAACAATAAGGGTCAAGCTGAGAGGGAATTCAAGATGGAAGTTCAAGCAATTGGACGCGTTCGGCATAAAAATTTGGTGAGGCTGCTTGGATATTGTGTTGAAGGAGCTCATAGGATGCTTGTTTATGAGTATGTGAACAATGGAAATCTAGAACAGTGGCTACATGGAGATGCCAACCCTTCGAGCCCCCTGACGTGGGATATCCGAATGAATATAATACTTGGAACTGCTAAAGGGTTGACATACCTTCATGAGGGGCTTGAGCCCAAGGTTGTTCATCGTGATATCAAGTCGAGCAATATATTGCTTGATAAGCGATGGAATCCGAAAGTTTCTGATTTTGGGCTTGCAAAACTTCTGGGATCCGAAAGGAGTTATGTGACGACTCGCGTGATGGGAACATTTGGATATGTGGCGCCAGAATATGCAAGCACTGGCATGTTGAACGAAAGAAGCGATGTGTATAGCTTTGGAGTTCTTCTTATGGAGATAATTTCTGGTAGAAACCCCGTTGATTATAGCCGTCCTCCTGGAGAGGTGAACCTGGTTGAGTGGCTGAAGACAATGGTTACAAACAGAAATGCAGGTGTACTGGATCCTAGGCTACCTGAGAAACCACCTTCTAGAGCACTGAAGCGTGCCTTATTAGTAGCTTTACGGTGTGTGGATCCAAATGTCCAGAAAAGGCCAAAGATGGGACATGTTATACATATGCTCGAAGCTGATGAGTTCCCATTTCGAGATGACCGTAGAGCTGGAAGGGAATATGGACGGTCCCATCAGGATAACACAGGAGATAGGTTGATGGAAAAGCGAGTGAGCGAATCTGCTGAAAGTAGTGCGTATGAAAGTAGTTCCCACACTAAATAG 1521 0.4701 MTSYAFLNDELSKHTSIFGLRLWVVLGICVGAAIVIVLFIISLWFTAKRNNASKLKSCHKPTNINIPNVSKEIQEIRIDHSREPTKPNLVPDPNPFPESQSEALDRAQAILLQQEDESPGTGPHKIHIEIGKDHRISYPERGGGSSHGSGEVRSGEQPSIAVPEVSHLGWGHWYTLRELEVSTSFFADENVIGEGGYGIVYRGVLRDNTNVAVKNLLNNKGQAEREFKMEVQAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVNNGNLEQWLHGDANPSSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKRWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAGVLDPRLPEKPPSRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRAGREYGRSHQDNTGDRLMEKRVSESAESSAYESSSHTK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1904 506 CDD STKc_IRAK 192 457 - -
Alju07g1904 506 Pfam Protein kinase domain 187 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1904 506 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Alju07g1904 506 FunFam Putative receptor-like serine/threonine-protein kinase 262 471 - -
Alju07g1904 506 PANTHER OS01G0323000 PROTEIN 1 489 - -
Alju07g1904 506 SMART serkin_6 186 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1904 506 ProSiteProfiles Protein kinase domain profile. 186 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1904 506 MobiDBLite consensus disorder prediction 466 506 - -
Alju07g1904 506 Gene3D Phosphorylase Kinase; domain 1 160 261 - -
Alju07g1904 506 SUPERFAMILY Protein kinase-like (PK-like) 167 457 IPR011009 -
Alju07g1904 506 MobiDBLite consensus disorder prediction 131 158 - -
Alju07g1904 506 Gene3D Transferase(Phosphotransferase) domain 1 262 468 - -
Alju07g1904 506 MobiDBLite consensus disorder prediction 466 494 - -
Alju07g1904 506 Coils Coil 206 226 - -
Alju07g1904 506 FunFam Probable serine/threonine-protein kinase At1g01540 166 261 - -
Alju07g1904 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1904 Alju-ChrAlju07 45312362 45314752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1904 140 499 Trihelix Transcription Factor Family AT1G70460 44.355 1.37e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Alju07g1904 Pkinase 2.4e-47 CL0016